Merge branch 'master' into build_target_cuda

Author: npolina4

.github/workflows/build-sphinx.yml

@@ -25,7 +25,7 @@ jobs:
   build-and-deploy:
     name: Build and Deploy Docs
 
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
 
     permissions:
       # Needed to cancel any previous runs that are not completed for a given workflow
@@ -235,7 +235,7 @@ jobs:
       # Needed to modify a comment in the pull request's issue
       pull-requests: write
 
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
 
     steps:
       - uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7

.github/workflows/conda-package.yml

@@ -14,8 +14,9 @@ env:
   # Follow oneAPI installation instruction for conda, since intel channel is not longer available
   # CHANNELS: '-c dppy/label/dev -c intel -c conda-forge --override-channels'
   CHANNELS: '-c dppy/label/dev -c https://software.repos.intel.com/python/conda/ -c conda-forge --override-channels'
-  CONDA_BUILD_VERSION: '24.5.1'
+  CONDA_BUILD_VERSION: '24.7.1'
   CONDA_INDEX_VERSION: '0.5.0'
+  RERUN_TESTS_ON_FAILURE: 'true'
   RUN_TESTS_MAX_ATTEMPTS: 2
   TEST_ENV_NAME: 'test'
   TEST_SCOPE: >-
@@ -72,7 +73,7 @@ jobs:
     strategy:
       matrix:
         python: ['3.9', '3.10', '3.11']
-        os: [ubuntu-20.04, windows-2019]
+        os: [ubuntu-22.04, windows-2019]
 
     permissions:
       # Needed to cancel any previous runs that are not completed for a given workflow
@@ -168,7 +169,7 @@ jobs:
     strategy:
       matrix:
         python: ['3.9', '3.10', '3.11']
-        os: [ubuntu-20.04, ubuntu-latest]
+        os: [ubuntu-22.04, ubuntu-latest]
 
     continue-on-error: true
 
@@ -255,14 +256,14 @@ jobs:
           python -c "import dpnp, dpctl; dpctl.lsplatform()"
           python -c "import dpnp; print(dpnp.__version__)"
 
-      # TODO: run the whole scope once the issues on CPU are resolved
-      # - name: Run tests
-        # run: |
-        #   python -m pytest -q -ra --disable-warnings -vv ${{ env.TEST_SCOPE }}
-        # working-directory: ${{ env.tests-path }}
+      - name: Run tests
+        if: env.RERUN_TESTS_ON_FAILURE != 'true'
+        run: |
+          python -m pytest -q -ra --disable-warnings -vv ${{ env.TEST_SCOPE }}
+        working-directory: ${{ env.tests-path }}
 
-      # TODO: remove once 2024.2 release is published
       - name: Run tests
+        if: env.RERUN_TESTS_ON_FAILURE == 'true'
         id: run_tests_linux
         uses: nick-fields/retry@7152eba30c6575329ac0576536151aca5a72780e # v3.0.0
         with:
@@ -411,14 +412,14 @@ jobs:
           python -c "import dpnp, dpctl; dpctl.lsplatform()"
           python -c "import dpnp; print(dpnp.__version__)"
 
-      # TODO: run the whole scope once the issues on CPU are resolved
-      # - name: Run tests
-      #   run: |
-      #     python -m pytest -q -ra --disable-warnings -vv ${{ env.TEST_SCOPE }}
-      #   working-directory: ${{ env.tests-path }}
+      - name: Run tests
+        if: env.RERUN_TESTS_ON_FAILURE != 'true'
+        run: |
+          python -m pytest -q -ra --disable-warnings -vv ${{ env.TEST_SCOPE }}
+        working-directory: ${{ env.tests-path }}
 
-      # TODO: remove once 2024.2 release is published
       - name: Run tests
+        if: env.RERUN_TESTS_ON_FAILURE == 'true'
         id: run_tests_win
         uses: nick-fields/retry@7152eba30c6575329ac0576536151aca5a72780e # v3.0.0
         with:
@@ -439,7 +440,7 @@ jobs:
     strategy:
       matrix:
         python: ['3.9', '3.10', '3.11']
-        os: [ubuntu-20.04, windows-2019]
+        os: [ubuntu-22.04, windows-2019]
 
     runs-on: ${{ matrix.os }}
 

.github/workflows/generate_coverage.yaml

@@ -9,7 +9,7 @@ permissions: read-all
 jobs:
   generate-coverage:
     name: Generate coverage and push to Coveralls.io
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
 
     permissions:
       # Needed to cancel any previous runs that are not completed for a given workflow
@@ -119,7 +119,7 @@ jobs:
       - name: Install coverall dependencies
         run: |
           sudo gem install coveralls-lcov
-          pip install coveralls==3.3.1
+          pip install coveralls==4.0.1
 
       - name: Upload coverage data to coveralls.io
         run: |

.github/workflows/openssf-scorecard.yml

@@ -38,7 +38,7 @@ jobs:
           persist-credentials: false
 
       - name: "Run analysis"
-        uses: ossf/scorecard-action@dc50aa9510b46c811795eb24b2f1ba02a914e534 # v2.3.3
+        uses: ossf/scorecard-action@62b2cac7ed8198b15735ed49ab1e5cf35480ba46 # v2.4.0
         with:
           results_file: results.sarif
           results_format: sarif
@@ -68,6 +68,6 @@ jobs:
 
       # Upload the results to GitHub's code scanning dashboard.
       - name: "Upload to code-scanning"
-        uses: github/codeql-action/upload-sarif@4fa2a7953630fd2f3fb380f21be14ede0169dd4f # v3.25.12
+        uses: github/codeql-action/upload-sarif@afb54ba388a7dca6ecae48f608c4ff05ff4cc77a # v3.25.15
         with:
           sarif_file: results.sarif

.github/workflows/pre-commit.yml

@@ -29,7 +29,7 @@ jobs:
         uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7
 
       - name: Set up python
-        uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d # v5.1.0
+        uses: actions/setup-python@39cd14951b08e74b54015e9e001cdefcf80e669f # v5.1.1
         with:
           python-version: '3.11'
 

.pre-commit-config.yaml

@@ -2,13 +2,13 @@
 # See https://pre-commit.com/hooks.html for more hooks
 repos:
 -   repo: https://github.com/PyCQA/bandit
-    rev: '1.7.8'
+    rev: '1.7.9'
     hooks:
     -   id: bandit
         pass_filenames: false
         args: ["-r", "dpnp", "-lll"]
 -   repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.5.0
+    rev: v4.6.0
     hooks:
     -   id: check-ast
     -   id: check-builtin-literals
@@ -43,13 +43,13 @@ repos:
     -   id: rst-inline-touching-normal
     -   id: text-unicode-replacement-char
 -   repo: https://github.com/codespell-project/codespell
-    rev: v2.2.6
+    rev: v2.3.0
     hooks:
     -   id: codespell
         additional_dependencies:
             - tomli
 -   repo: https://github.com/psf/black
-    rev: 24.4.0
+    rev: 24.4.2
     hooks:
     -   id: black
         args: ["--check", "--diff", "--color"]
@@ -65,20 +65,20 @@ repos:
         name: isort (pyi)
         types: [pyi]
 -   repo: https://github.com/pycqa/flake8
-    rev: 7.0.0
+    rev: 7.1.0
     hooks:
     -   id: flake8
         args: ["--config=.flake8"]
         additional_dependencies:
             - flake8-docstrings==1.7.0
-            - flake8-bugbear==24.1.17
+            - flake8-bugbear==24.4.26
 -   repo: https://github.com/pocc/pre-commit-hooks
     rev: v1.3.5
     hooks:
     -   id: clang-format
         args: ["-i"]
 -   repo: https://github.com/gitleaks/gitleaks
-    rev: v8.18.2
+    rev: v8.18.4
     hooks:
     -   id: gitleaks
 -   repo: https://github.com/jumanjihouse/pre-commit-hooks

CMakeLists.txt

@@ -53,8 +53,8 @@ include(GNUInstallDirs)
 include(FetchContent)
 FetchContent_Declare(
     pybind11
-    URL https://github.com/pybind/pybind11/archive/refs/tags/v2.12.0.tar.gz
-    URL_HASH SHA256=bf8f242abd1abcd375d516a7067490fb71abd79519a282d22b6e4d19282185a7
+    URL https://github.com/pybind/pybind11/archive/refs/tags/v2.13.1.tar.gz
+    URL_HASH SHA256=51631e88960a8856f9c497027f55c9f2f9115cafb08c0005439838a05ba17bfc
 )
 FetchContent_MakeAvailable(pybind11)
 

CODE_OF_CONDUCT.md

@@ -6,7 +6,7 @@ In the interest of fostering an open and welcoming environment, we as
 contributors and maintainers pledge to making participation in our project and
 our community a harassment-free experience for everyone, regardless of age, body
 size, disability, ethnicity, sex characteristics, gender identity and expression,
-level of experience, education, socio-economic status, nationality, personal
+level of experience, education, socioeconomic status, nationality, personal
 appearance, race, religion, or sexual identity and orientation.
 
 ## Our Standards

conda-recipe/meta.yaml

@@ -1,8 +1,5 @@
-{% set required_compiler_and_mkl_version = "2024.0" %}
-{% set excluded_compiler_version1 = "2024.0.1" %}
-{% set excluded_compiler_version2 = "2024.0.2" %}
-{% set excluded_compiler_version3 = "2024.0.3" %}
-{% set required_dpctl_version = "0.17.0" %}
+{% set required_compiler_and_mkl_version = "2024.2" %}
+{% set required_dpctl_version = "0.18.0*" %}
 
 package:
     name: dpnp
@@ -27,14 +24,18 @@ requirements:
       - scikit-build
     build:
       - {{ compiler('cxx') }}
-      - {{ compiler('dpcpp') }} >={{ required_compiler_and_mkl_version }},!={{ excluded_compiler_version1 }},!={{ excluded_compiler_version2 }},!={{ excluded_compiler_version3 }} # [win]
-      - {{ compiler('dpcpp') }} >={{ required_compiler_and_mkl_version }},!={{ excluded_compiler_version1 }},!={{ excluded_compiler_version2 }} # [linux]
+      - {{ compiler('dpcpp') }} >={{ required_compiler_and_mkl_version }}
       - sysroot_linux-64 >=2.28 # [linux]
     run:
       - python
       - {{ pin_compatible('dpctl', min_pin='x.x.x', max_pin=None) }}
       - {{ pin_compatible('dpcpp-cpp-rt', min_pin='x.x', max_pin='x') }}
-      - {{ pin_compatible('mkl-dpcpp', min_pin='x.x', max_pin='x') }}
+      - {{ pin_compatible('onemkl-sycl-blas', min_pin='x.x', max_pin='x') }}
+      - {{ pin_compatible('onemkl-sycl-dft', min_pin='x.x', max_pin='x') }}
+      - {{ pin_compatible('onemkl-sycl-lapack', min_pin='x.x', max_pin='x') }}
+      - {{ pin_compatible('onemkl-sycl-rng', min_pin='x.x', max_pin='x') }}
+      - {{ pin_compatible('onemkl-sycl-stats', min_pin='x.x', max_pin='x') }}
+      - {{ pin_compatible('onemkl-sycl-vm', min_pin='x.x', max_pin='x') }}
       - {{ pin_compatible('numpy', min_pin='x.x', max_pin='x') }}
 
 build:

doc/quick_start_guide.rst

@@ -37,15 +37,14 @@ in the next installation section.
 Installation
 ============
 
-Install Package from Anaconda
------------------------------
+Install Package from Intel(R) channel
+-------------------------------------------
 
-It is recommended to use conda packages from the ``anaconda.org/intel``
-channel. You will need one of the commands below:
+You will need one of the commands below:
 
-* Conda: ``conda install dpnp -c intel -c conda-forge``
+* Conda: ``conda install dpnp -c https://software.repos.intel.com/python/conda/ -c conda-forge``
 
-* Pip: ``pip install -i https://pypi.anaconda.org/intel/simple dpnp``
+* Pip: ``python -m pip install --index-url https://pypi.anaconda.org/intel/simple dpnp``
 
 These commands install dpnp package along with its dependencies, including
 ``dpctl`` package with `Data Parallel Control Library`_ and all required
@@ -69,7 +68,7 @@ And to build dpnp package from the sources:
 
 .. code-block:: bash
 
-    conda build conda-recipe -c intel -c conda-forge
+    conda build conda-recipe -c https://software.repos.intel.com/python/conda/ -c conda-forge
 
 Finally, to install the result package:
 
@@ -89,14 +88,14 @@ On Linux:
 
 .. code-block:: bash
 
-    conda create -n build-env dpctl cython dpcpp_linux-64 mkl-devel-dpcpp tbb-devel onedpl-devel cmake scikit-build ninja pytest -c intel -c conda-forge
+    conda create -n build-env dpctl cython dpcpp_linux-64 mkl-devel-dpcpp tbb-devel onedpl-devel cmake scikit-build ninja pytest -c https://software.repos.intel.com/python/conda/ -c conda-forge
     conda activate build-env
 
 On Windows:
 
 .. code-block:: bash
 
-    conda create -n build-env dpctl cython dpcpp_win-64 mkl-devel-dpcpp tbb-devel onedpl-devel cmake scikit-build ninja pytest -c intel -c conda-forge
+    conda create -n build-env dpctl cython dpcpp_win-64 mkl-devel-dpcpp tbb-devel onedpl-devel cmake scikit-build ninja pytest -c https://software.repos.intel.com/python/conda/ -c conda-forge
     conda activate build-env
 
 To build and install the package on Linux OS, run:

doc/reference/manipulation.rst

@@ -131,6 +131,7 @@ Adding and removing elements
    dpnp.resize
    dpnp.unique
    dpnp.trim_zeros
+   dpnp.pad
 
 
 Rearranging elements