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Merge pull request #510 from Project-MONAI/nds-upMessaging
Nds up messaging
2 parents 79eeb1b + a8a0be6 commit b146513

32 files changed

+285
-246
lines changed

‎.dockleignore

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# Copyright 2023 MONAI Consortium
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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# Checked and no actual secrets found in dockerfile, just some environment variables for compatibility
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CIS-DI-0010
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‎.github/workflows/ci.yml

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@@ -433,13 +433,26 @@ jobs:
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tags: ${{ steps.meta.outputs.tags }}
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labels: ${{ steps.meta.outputs.labels }}
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- name: Scan image with Azure Container Scan
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env:
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TRIVY_TIMEOUT_SEC: 360s
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uses: Azure/[email protected]
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- name: Run Trivy vulnerability scanner
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uses: aquasecurity/trivy-action@master
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if: ${{ (matrix.os == 'ubuntu-latest') }}
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with:
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image-name: ${{ fromJSON(steps.meta.outputs.json).tags[0] }}
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image-ref: ${{ fromJSON(steps.meta.outputs.json).tags[0] }}
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format: 'table'
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exit-code: '1'
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ignore-unfixed: true
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vuln-type: 'os,library'
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severity: 'CRITICAL'
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- name: Run dockle scan
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id: dockle-scan
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uses: goodwithtech/dockle-action@main
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if: ${{ (matrix.os == 'ubuntu-latest') }}
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with:
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image: ${{ fromJSON(steps.meta.outputs.json).tags[0] }}
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format: 'list'
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exit-code: '1'
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exit-level: 'warn'
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- name: Anchore container scan
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id: anchore-scan
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fail-build: true
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severity-cutoff: critical
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- name: Upload Anchore scan SARIF report
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- name: Upload scan SARIF report
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uses: github/codeql-action/upload-sarif@v2
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if: ${{ (matrix.os == 'ubuntu-latest') }}
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with:

‎Dockerfile

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@@ -27,6 +27,7 @@ RUN dotnet publish -c Release -o out --nologo src/InformaticsGateway/Monai.Deplo
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# Build runtime image
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FROM mcr.microsoft.com/dotnet/aspnet:8.0-jammy
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RUN adduser --system --group --no-create-home appuser
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# Enable elastic client compatibility mode
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ENV ELASTIC_CLIENT_APIVERSIONING=true
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RUN apt-get clean \
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&& apt-get update \
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&& apt-get install -y --no-install-recommends curl \
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&& apt-get install -y libc6-dev=2.35-0ubuntu3.6 # this is a workaround for Mongo encryption library
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RUN rm -rf /var/lib/apt/lists
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&& apt-get install -y libc6-dev=2.35-0ubuntu3.6 \
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&& rm -rf /var/lib/apt/lists # this is a workaround for Mongo encryption library
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WORKDIR /opt/monai/ig
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RUN chown -R appuser:appuser /opt/monai/ig
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COPY --from=build /app/out .
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COPY --from=build /tools /opt/dotnetcore-tools
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COPY LICENSE ./
@@ -58,4 +62,6 @@ HEALTHCHECK --interval=10s --retries=10 CMD curl --fail http://localhost:5000/he
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RUN ls -lR /opt/monai/ig
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ENV PATH="/opt/dotnetcore-tools:${PATH}"
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USER appuser
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ENTRYPOINT ["/opt/monai/ig/Monai.Deploy.InformaticsGateway"]

‎doc/dependency_decisions.yml

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- :versions:
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- 8.0.0
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- 8.0.1
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- 8.0.2
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- 8.0.3
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:when: 2022-10-14T23:37:16.793Z
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:who: mocsharp
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:why: MIT (https://github.com/dotnet/runtime/raw/main/LICENSE.TXT)
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- - :approve
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- Monai.Deploy.Messaging
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- :versions:
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- 2.0.0
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- 2.0.2
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:when: 2023-10-13T18:06:21.511Z
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:who: neilsouth
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:why: Apache-2.0 (https://github.com/Project-MONAI/monai-deploy-messaging/raw/main/LICENSE)
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- - :approve
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- Monai.Deploy.Messaging.RabbitMQ
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- :versions:
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- 2.0.0
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- 2.0.2
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:when: 2023-10-13T18:06:21.511Z
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:who: neilsouth
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:why: Apache-2.0 (https://github.com/Project-MONAI/monai-deploy-messaging/raw/main/LICENSE)

‎src/Api/Monai.Deploy.InformaticsGateway.Api.csproj

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<PackageReference Include="fo-dicom" Version="5.1.2" />
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<PackageReference Include="HL7-dotnetcore" Version="2.36.0" />
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<PackageReference Include="Macross.Json.Extensions" Version="3.0.0" />
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<PackageReference Include="Monai.Deploy.Messaging" Version="2.0.0" />
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<PackageReference Include="Monai.Deploy.Messaging.RabbitMQ" Version="2.0.0" />
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<PackageReference Include="Monai.Deploy.Messaging" Version="2.0.2" />
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<PackageReference Include="Monai.Deploy.Messaging.RabbitMQ" Version="2.0.2" />
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<PackageReference Include="Monai.Deploy.Storage" Version="1.0.0" />
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<PackageReference Include="Microsoft.EntityFrameworkCore.Abstractions" Version="8.0.0" />
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</ItemGroup>

‎src/Api/Test/packages.lock.json

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},
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"Monai.Deploy.Messaging": {
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"type": "Transitive",
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"resolved": "2.0.0",
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"contentHash": "LcerCeHWDSB3Q1Vw0La9pYvXdNNDu4nGUie2bvVlL8lCkxbVNx+rtDorV5cA8KSKW9GZd/RD6SAsIzcjMXqP6Q==",
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"resolved": "2.0.2",
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"contentHash": "iQsD13BAnpbkv1xIVS4cRT2ZXjtcvHJFXlzvTaXjSEEtgGRR7f/IW/9smM2mZlPAyjmRdzk6hyye2vw6rl/tTw==",
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"dependencies": {
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"Ardalis.GuardClauses": "4.3.0",
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"Microsoft.Extensions.Diagnostics.HealthChecks": "8.0.0",
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},
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"Monai.Deploy.Messaging.RabbitMQ": {
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"type": "Transitive",
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"resolved": "2.0.0",
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"contentHash": "J5dXjOBqA59irTcFbfwxIQnLxUXGcMCA/cuk1+TJgscMeb2WTVks3esZmcs3pOY2OIBmOROvBl/6KaL9cYFPmg==",
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"resolved": "2.0.2",
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"contentHash": "nrMwCJloWpOpPJaYvKJzZIWb3B0B5+Ktz4SP2NApbmreiEI88m9Gab+Q6GuwNvFB+nrtJFDAl/gtdHwV251rcw==",
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"dependencies": {
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"Monai.Deploy.Messaging": "2.0.0",
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"Polly": "8.2.0",
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"Monai.Deploy.Messaging": "2.0.2",
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"Polly": "8.2.1",
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"RabbitMQ.Client": "6.8.1"
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}
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},
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},
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"Polly": {
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"type": "Transitive",
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"resolved": "8.2.0",
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"contentHash": "KZm8iG29y6Mse7YntYYJSf5fGWuhYLliWgZaG/8NcuXS4gN7SPdtPYpjCxQlHqxvMGubkWVrGp3MvUaI7SkyKA==",
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"resolved": "8.2.1",
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"contentHash": "tVHvP5Z0fNoZCE9mpKAsh0IaValwsTGPrqjlWqkWR/Gpl5jL05HWC/AVGSL+jkAqkl1Jn7uBUOArnRD+dK5PfQ==",
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"dependencies": {
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"Polly.Core": "8.2.0"
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"Polly.Core": "8.2.1"
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}
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},
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"Polly.Core": {
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"type": "Transitive",
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"resolved": "8.2.0",
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"contentHash": "gnKp3+mxGFmkFs4eHcD9aex0JOF8zS1Y18c2A5ckXXTVqbs6XLcDyLKgSa/mUFqAnH3mn9+uVIM0RhAec/d3kA=="
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"resolved": "8.2.1",
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"contentHash": "/Z3EspfWBdTla4I9IAcQn32/7kB5WS3rSnOYloz8YlVyClu8h7uuYf4pfUvffOYVbxmDX/mFRfxwzqW2Zs96ZA=="
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},
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"RabbitMQ.Client": {
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"type": "Transitive",
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"Macross.Json.Extensions": "[3.0.0, )",
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"Microsoft.EntityFrameworkCore.Abstractions": "[8.0.0, )",
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"Monai.Deploy.InformaticsGateway.Common": "[1.0.0, )",
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"Monai.Deploy.Messaging": "[2.0.0, )",
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"Monai.Deploy.Messaging.RabbitMQ": "[2.0.0, )",
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"Monai.Deploy.Messaging": "[2.0.2, )",
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"Monai.Deploy.Messaging.RabbitMQ": "[2.0.2, )",
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"Monai.Deploy.Storage": "[1.0.0, )",
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"fo-dicom": "[5.1.2, )"
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}

‎src/Api/packages.lock.json

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},
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"Microsoft.NET.ILLink.Tasks": {
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"type": "Direct",
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"requested": "[8.0.1, )",
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"resolved": "8.0.1",
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"contentHash": "ADdJXuKNjwZDfBmybMnpvwd5CK3gp92WkWqqeQhW4W+q4MO3Qaa9QyW2DcFLAvCDMcCWxT5hRXqGdv13oon7nA=="
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"requested": "[8.0.2, )",
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"resolved": "8.0.2",
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"contentHash": "hKTrehpfVzOhAz0mreaTAZgbz0DrMEbWq4n3hAo8Ks6WdxdqQhNPvzOqn9VygKuWf1bmxPdraqzTaXriO/sn0A=="
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},
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"Monai.Deploy.Messaging": {
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"type": "Direct",
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"requested": "[2.0.0, )",
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"resolved": "2.0.0",
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"contentHash": "LcerCeHWDSB3Q1Vw0La9pYvXdNNDu4nGUie2bvVlL8lCkxbVNx+rtDorV5cA8KSKW9GZd/RD6SAsIzcjMXqP6Q==",
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"requested": "[2.0.2, )",
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"resolved": "2.0.2",
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"contentHash": "iQsD13BAnpbkv1xIVS4cRT2ZXjtcvHJFXlzvTaXjSEEtgGRR7f/IW/9smM2mZlPAyjmRdzk6hyye2vw6rl/tTw==",
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"dependencies": {
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"Ardalis.GuardClauses": "4.3.0",
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"Microsoft.Extensions.Diagnostics.HealthChecks": "8.0.0",
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},
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"Monai.Deploy.Messaging.RabbitMQ": {
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"type": "Direct",
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"requested": "[2.0.0, )",
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"resolved": "2.0.0",
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"contentHash": "J5dXjOBqA59irTcFbfwxIQnLxUXGcMCA/cuk1+TJgscMeb2WTVks3esZmcs3pOY2OIBmOROvBl/6KaL9cYFPmg==",
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"requested": "[2.0.2, )",
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"resolved": "2.0.2",
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"contentHash": "nrMwCJloWpOpPJaYvKJzZIWb3B0B5+Ktz4SP2NApbmreiEI88m9Gab+Q6GuwNvFB+nrtJFDAl/gtdHwV251rcw==",
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"dependencies": {
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"Monai.Deploy.Messaging": "2.0.0",
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"Polly": "8.2.0",
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"Monai.Deploy.Messaging": "2.0.2",
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"Polly": "8.2.1",
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"RabbitMQ.Client": "6.8.1"
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}
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},
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},
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"Polly": {
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"type": "Transitive",
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"resolved": "8.2.0",
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"contentHash": "KZm8iG29y6Mse7YntYYJSf5fGWuhYLliWgZaG/8NcuXS4gN7SPdtPYpjCxQlHqxvMGubkWVrGp3MvUaI7SkyKA==",
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"resolved": "8.2.1",
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"contentHash": "tVHvP5Z0fNoZCE9mpKAsh0IaValwsTGPrqjlWqkWR/Gpl5jL05HWC/AVGSL+jkAqkl1Jn7uBUOArnRD+dK5PfQ==",
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"dependencies": {
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"Polly.Core": "8.2.0"
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"Polly.Core": "8.2.1"
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}
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},
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"Polly.Core": {
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"type": "Transitive",
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"resolved": "8.2.0",
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"contentHash": "gnKp3+mxGFmkFs4eHcD9aex0JOF8zS1Y18c2A5ckXXTVqbs6XLcDyLKgSa/mUFqAnH3mn9+uVIM0RhAec/d3kA=="
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"resolved": "8.2.1",
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"contentHash": "/Z3EspfWBdTla4I9IAcQn32/7kB5WS3rSnOYloz8YlVyClu8h7uuYf4pfUvffOYVbxmDX/mFRfxwzqW2Zs96ZA=="
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"RabbitMQ.Client": {
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‎src/CLI/Test/packages.lock.json

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},
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"Monai.Deploy.Messaging": {
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"type": "Transitive",
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"resolved": "2.0.0",
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"contentHash": "LcerCeHWDSB3Q1Vw0La9pYvXdNNDu4nGUie2bvVlL8lCkxbVNx+rtDorV5cA8KSKW9GZd/RD6SAsIzcjMXqP6Q==",
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"resolved": "2.0.2",
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"contentHash": "iQsD13BAnpbkv1xIVS4cRT2ZXjtcvHJFXlzvTaXjSEEtgGRR7f/IW/9smM2mZlPAyjmRdzk6hyye2vw6rl/tTw==",
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"dependencies": {
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"Ardalis.GuardClauses": "4.3.0",
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"Microsoft.Extensions.Diagnostics.HealthChecks": "8.0.0",
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},
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"Monai.Deploy.Messaging.RabbitMQ": {
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"type": "Transitive",
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"resolved": "2.0.0",
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"contentHash": "J5dXjOBqA59irTcFbfwxIQnLxUXGcMCA/cuk1+TJgscMeb2WTVks3esZmcs3pOY2OIBmOROvBl/6KaL9cYFPmg==",
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"resolved": "2.0.2",
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"contentHash": "nrMwCJloWpOpPJaYvKJzZIWb3B0B5+Ktz4SP2NApbmreiEI88m9Gab+Q6GuwNvFB+nrtJFDAl/gtdHwV251rcw==",
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"dependencies": {
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"Monai.Deploy.Messaging": "2.0.0",
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"Polly": "8.2.0",
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"Monai.Deploy.Messaging": "2.0.2",
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"Polly": "8.2.1",
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"RabbitMQ.Client": "6.8.1"
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},
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},
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"Polly": {
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"type": "Transitive",
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"resolved": "8.2.0",
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"contentHash": "KZm8iG29y6Mse7YntYYJSf5fGWuhYLliWgZaG/8NcuXS4gN7SPdtPYpjCxQlHqxvMGubkWVrGp3MvUaI7SkyKA==",
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"resolved": "8.2.1",
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"contentHash": "tVHvP5Z0fNoZCE9mpKAsh0IaValwsTGPrqjlWqkWR/Gpl5jL05HWC/AVGSL+jkAqkl1Jn7uBUOArnRD+dK5PfQ==",
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"dependencies": {
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"Polly.Core": "8.2.0"
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"Polly.Core": "8.2.1"
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}
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},
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"Polly.Core": {
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"type": "Transitive",
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"resolved": "8.2.0",
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"contentHash": "gnKp3+mxGFmkFs4eHcD9aex0JOF8zS1Y18c2A5ckXXTVqbs6XLcDyLKgSa/mUFqAnH3mn9+uVIM0RhAec/d3kA=="
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"resolved": "8.2.1",
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"contentHash": "/Z3EspfWBdTla4I9IAcQn32/7kB5WS3rSnOYloz8YlVyClu8h7uuYf4pfUvffOYVbxmDX/mFRfxwzqW2Zs96ZA=="
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},
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"RabbitMQ.Client": {
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"type": "Transitive",
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"Macross.Json.Extensions": "[3.0.0, )",
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"Microsoft.EntityFrameworkCore.Abstractions": "[8.0.0, )",
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"Monai.Deploy.InformaticsGateway.Common": "[1.0.0, )",
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"Monai.Deploy.Messaging": "[2.0.0, )",
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"Monai.Deploy.Messaging.RabbitMQ": "[2.0.0, )",
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"Monai.Deploy.Messaging": "[2.0.2, )",
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"Monai.Deploy.Messaging.RabbitMQ": "[2.0.2, )",
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"Monai.Deploy.Storage": "[1.0.0, )",
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"fo-dicom": "[5.1.2, )"
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}

‎src/CLI/packages.lock.json

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},
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"Microsoft.NET.ILLink.Tasks": {
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"type": "Direct",
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"requested": "[8.0.1, )",
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"resolved": "8.0.1",
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"contentHash": "ADdJXuKNjwZDfBmybMnpvwd5CK3gp92WkWqqeQhW4W+q4MO3Qaa9QyW2DcFLAvCDMcCWxT5hRXqGdv13oon7nA=="
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"requested": "[8.0.2, )",
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"resolved": "8.0.2",
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"contentHash": "hKTrehpfVzOhAz0mreaTAZgbz0DrMEbWq4n3hAo8Ks6WdxdqQhNPvzOqn9VygKuWf1bmxPdraqzTaXriO/sn0A=="
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},
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"System.CommandLine.Hosting": {
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"type": "Direct",
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},
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"Monai.Deploy.Messaging": {
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"type": "Transitive",
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"resolved": "2.0.0",
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"contentHash": "LcerCeHWDSB3Q1Vw0La9pYvXdNNDu4nGUie2bvVlL8lCkxbVNx+rtDorV5cA8KSKW9GZd/RD6SAsIzcjMXqP6Q==",
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"resolved": "2.0.2",
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"contentHash": "iQsD13BAnpbkv1xIVS4cRT2ZXjtcvHJFXlzvTaXjSEEtgGRR7f/IW/9smM2mZlPAyjmRdzk6hyye2vw6rl/tTw==",
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"dependencies": {
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"Ardalis.GuardClauses": "4.3.0",
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"Microsoft.Extensions.Diagnostics.HealthChecks": "8.0.0",
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},
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"Monai.Deploy.Messaging.RabbitMQ": {
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"type": "Transitive",
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"resolved": "2.0.0",
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"contentHash": "J5dXjOBqA59irTcFbfwxIQnLxUXGcMCA/cuk1+TJgscMeb2WTVks3esZmcs3pOY2OIBmOROvBl/6KaL9cYFPmg==",
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"resolved": "2.0.2",
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"contentHash": "nrMwCJloWpOpPJaYvKJzZIWb3B0B5+Ktz4SP2NApbmreiEI88m9Gab+Q6GuwNvFB+nrtJFDAl/gtdHwV251rcw==",
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"dependencies": {
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"Monai.Deploy.Messaging": "2.0.0",
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"Polly": "8.2.0",
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"Monai.Deploy.Messaging": "2.0.2",
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"Polly": "8.2.1",
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"RabbitMQ.Client": "6.8.1"
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},
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"Polly": {
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"type": "Transitive",
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"resolved": "8.2.0",
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"contentHash": "KZm8iG29y6Mse7YntYYJSf5fGWuhYLliWgZaG/8NcuXS4gN7SPdtPYpjCxQlHqxvMGubkWVrGp3MvUaI7SkyKA==",
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"resolved": "8.2.1",
481+
"contentHash": "tVHvP5Z0fNoZCE9mpKAsh0IaValwsTGPrqjlWqkWR/Gpl5jL05HWC/AVGSL+jkAqkl1Jn7uBUOArnRD+dK5PfQ==",
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"dependencies": {
483-
"Polly.Core": "8.2.0"
483+
"Polly.Core": "8.2.1"
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}
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},
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"Polly.Core": {
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"type": "Transitive",
488-
"resolved": "8.2.0",
489-
"contentHash": "gnKp3+mxGFmkFs4eHcD9aex0JOF8zS1Y18c2A5ckXXTVqbs6XLcDyLKgSa/mUFqAnH3mn9+uVIM0RhAec/d3kA=="
488+
"resolved": "8.2.1",
489+
"contentHash": "/Z3EspfWBdTla4I9IAcQn32/7kB5WS3rSnOYloz8YlVyClu8h7uuYf4pfUvffOYVbxmDX/mFRfxwzqW2Zs96ZA=="
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},
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"RabbitMQ.Client": {
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"type": "Transitive",
@@ -599,8 +599,8 @@
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"Macross.Json.Extensions": "[3.0.0, )",
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"Microsoft.EntityFrameworkCore.Abstractions": "[8.0.0, )",
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"Monai.Deploy.InformaticsGateway.Common": "[1.0.0, )",
602-
"Monai.Deploy.Messaging": "[2.0.0, )",
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"Monai.Deploy.Messaging.RabbitMQ": "[2.0.0, )",
602+
"Monai.Deploy.Messaging": "[2.0.2, )",
603+
"Monai.Deploy.Messaging.RabbitMQ": "[2.0.2, )",
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"Monai.Deploy.Storage": "[1.0.0, )",
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"fo-dicom": "[5.1.2, )"
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}

‎src/Client.Common/packages.lock.json

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -10,9 +10,9 @@
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},
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"Microsoft.NET.ILLink.Tasks": {
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"type": "Direct",
13-
"requested": "[8.0.1, )",
14-
"resolved": "8.0.1",
15-
"contentHash": "ADdJXuKNjwZDfBmybMnpvwd5CK3gp92WkWqqeQhW4W+q4MO3Qaa9QyW2DcFLAvCDMcCWxT5hRXqGdv13oon7nA=="
13+
"requested": "[8.0.2, )",
14+
"resolved": "8.0.2",
15+
"contentHash": "hKTrehpfVzOhAz0mreaTAZgbz0DrMEbWq4n3hAo8Ks6WdxdqQhNPvzOqn9VygKuWf1bmxPdraqzTaXriO/sn0A=="
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}
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}
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}

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