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gh-235 Rename Sqlite to EntityFramework
Signed-off-by: Victor Chang <[email protected]>
1 parent 0ba1a4f commit d5531ab

34 files changed

+39
-42
lines changed

‎.licenserc.yaml

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@@ -30,7 +30,7 @@ header:
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- 'src/.sonarlint/**'
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- 'src/coverlet.runsettings'
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- 'src/Monai.Deploy.InformaticsGateway.sln'
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- 'src/Database/Migrations/**'
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- 'src/Database/EntityFramework/Migrations/**'
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- 'demos/**/.env/**'
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- 'demos/**/*.txt'
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- 'doc/dependency_decisions.yml'

‎src/Database/DatabaseManager.cs

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@@ -19,8 +19,8 @@
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using Microsoft.Extensions.DependencyInjection;
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using Monai.Deploy.InformaticsGateway.Configuration;
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using Monai.Deploy.InformaticsGateway.Database.Api;
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using Monai.Deploy.InformaticsGateway.Database.Sqlite;
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using Monai.Deploy.InformaticsGateway.Database.Sqlite.Configurations;
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using Monai.Deploy.InformaticsGateway.Database.EntityFramework;
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using Monai.Deploy.InformaticsGateway.Database.EntityFramework.Configurations;
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namespace Monai.Deploy.InformaticsGateway.Database
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{
@@ -38,7 +38,8 @@ public static IServiceCollection ConfigureDatabase(this IServiceCollection servi
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switch (databaseType)
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{
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case "Sqlite":
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services.AddScoped<IDatabaseMigrationManager, SqliteDatabaseMigrationManager>();
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services.AddScoped<IDatabaseMigrationManager, EfDatabaseMigrationManager>();
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services.AddScoped(typeof(IInformaticsGatewayRepository<>), typeof(InformaticsGatewayRepository<>));
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services.AddDbContext<InformaticsGatewayContext>(
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options => options.UseSqlite(connectionStringConfigurationSection[SR.DatabaseConnectionStringKey]),
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ServiceLifetime.Transient);

‎src/Database/Sqlite/Configurations/DestinationApplicationEntityConfiguration.cs renamed to ‎src/Database/EntityFramework/Configuration/DestinationApplicationEntityConfiguration.cs

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using Microsoft.EntityFrameworkCore.Metadata.Builders;
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using Monai.Deploy.InformaticsGateway.Api;
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namespace Monai.Deploy.InformaticsGateway.Database.Sqlite.Configurations
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namespace Monai.Deploy.InformaticsGateway.Database.EntityFramework.Configurations
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{
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internal class DestinationApplicationEntityConfiguration : IEntityTypeConfiguration<DestinationApplicationEntity>
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{

‎src/Database/Sqlite/Configurations/InferenceRequestConfiguration.cs renamed to ‎src/Database/EntityFramework/Configuration/InferenceRequestConfiguration.cs

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@@ -25,7 +25,7 @@
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using Microsoft.EntityFrameworkCore.Metadata.Builders;
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using Monai.Deploy.InformaticsGateway.Api.Rest;
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namespace Monai.Deploy.InformaticsGateway.Database.Sqlite.Configurations
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namespace Monai.Deploy.InformaticsGateway.Database.EntityFramework.Configurations
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{
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internal class InferenceRequestConfiguration : IEntityTypeConfiguration<InferenceRequest>
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{

‎src/Database/Sqlite/Configurations/MonaiApplicationEntityConfiguration.cs renamed to ‎src/Database/EntityFramework/Configuration/MonaiApplicationEntityConfiguration.cs

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using Microsoft.EntityFrameworkCore.Metadata.Builders;
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using Monai.Deploy.InformaticsGateway.Api;
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namespace Monai.Deploy.InformaticsGateway.Database.Sqlite.Configurations
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namespace Monai.Deploy.InformaticsGateway.Database.EntityFramework.Configurations
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{
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internal class MonaiApplicationEntityConfiguration : IEntityTypeConfiguration<MonaiApplicationEntity>
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{

‎src/Database/Sqlite/Configurations/PayloadConfiguration.cs renamed to ‎src/Database/EntityFramework/Configuration/PayloadConfiguration.cs

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@@ -24,7 +24,7 @@
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using Microsoft.EntityFrameworkCore.Metadata.Builders;
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using Monai.Deploy.InformaticsGateway.Api.Storage;
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namespace Monai.Deploy.InformaticsGateway.Database.Sqlite.Configurations
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namespace Monai.Deploy.InformaticsGateway.Database.EntityFramework.Configurations
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{
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internal class PayloadConfiguration : IEntityTypeConfiguration<Payload>
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{

‎src/Database/Sqlite/Configurations/SR.cs renamed to ‎src/Database/EntityFramework/Configuration/SR.cs

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* limitations under the License.
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*/
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namespace Monai.Deploy.InformaticsGateway.Database.Sqlite.Configurations
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namespace Monai.Deploy.InformaticsGateway.Database.EntityFramework.Configurations
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{
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public static class SR
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{

‎src/Database/Sqlite/Configurations/SourceApplicationEntityConfiguration.cs renamed to ‎src/Database/EntityFramework/Configuration/SourceApplicationEntityConfiguration.cs

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using Microsoft.EntityFrameworkCore;
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using Monai.Deploy.InformaticsGateway.Api;
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namespace Monai.Deploy.InformaticsGateway.Database.Sqlite.Configurations
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namespace Monai.Deploy.InformaticsGateway.Database.EntityFramework.Configurations
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{
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internal class SourceApplicationEntityConfiguration : IEntityTypeConfiguration<SourceApplicationEntity>
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{

‎src/Database/Sqlite/Configurations/StorageMetadataWrapperEntityConfiguration.cs renamed to ‎src/Database/EntityFramework/Configuration/StorageMetadataWrapperEntityConfiguration.cs

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using Microsoft.EntityFrameworkCore.Metadata.Builders;
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using Monai.Deploy.InformaticsGateway.Database.Api;
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namespace Monai.Deploy.InformaticsGateway.Database.Sqlite.Configurations
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namespace Monai.Deploy.InformaticsGateway.Database.EntityFramework.Configurations
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{
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internal class StorageMetadataWrapperEntityConfiguration : IEntityTypeConfiguration<StorageMetadataWrapper>
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{

‎src/Database/Sqlite/SqliteDatabaseMigrationManager.cs renamed to ‎src/Database/EntityFramework/EfDatabaseMigrationManager.cs

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@@ -20,9 +20,9 @@
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using Microsoft.Extensions.Logging;
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using Monai.Deploy.InformaticsGateway.Database.Api;
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namespace Monai.Deploy.InformaticsGateway.Database.Sqlite
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namespace Monai.Deploy.InformaticsGateway.Database.EntityFramework
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{
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public class SqliteDatabaseMigrationManager : IDatabaseMigrationManager
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public class EfDatabaseMigrationManager : IDatabaseMigrationManager
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{
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public IHost Migrate(IHost host)
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{

‎src/Database/Sqlite/InformaticsGatewayContext.cs renamed to ‎src/Database/EntityFramework/InformaticsGatewayContext.cs

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using Microsoft.EntityFrameworkCore.Diagnostics;
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using Microsoft.Extensions.Logging;
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using Monai.Deploy.InformaticsGateway.Api;
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using Monai.Deploy.InformaticsGateway.Database.Sqlite.Configurations;
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using Monai.Deploy.InformaticsGateway.Database.EntityFramework.Configurations;
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namespace Monai.Deploy.InformaticsGateway.Database.Sqlite
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namespace Monai.Deploy.InformaticsGateway.Database.EntityFramework
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{
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public class InformaticsGatewayContext : DbContext
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{

‎src/Database/Sqlite/InformaticsGatewayContextFactory.cs renamed to ‎src/Database/EntityFramework/InformaticsGatewayContextFactory.cs

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using Microsoft.EntityFrameworkCore.Design;
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using Microsoft.Extensions.Configuration;
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namespace Monai.Deploy.InformaticsGateway.Database.Sqlite
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namespace Monai.Deploy.InformaticsGateway.Database.EntityFramework
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{
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/// <summary>
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/// Used to EF migration.

‎src/Database/Sqlite/InformaticsGatewayRepository.cs renamed to ‎src/Database/EntityFramework/InformaticsGatewayRepository.cs

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using Microsoft.Extensions.DependencyInjection;
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using Monai.Deploy.InformaticsGateway.Database.Api;
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namespace Monai.Deploy.InformaticsGateway.Database.Sqlite
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namespace Monai.Deploy.InformaticsGateway.Database.EntityFramework
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{
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public class InformaticsGatewayRepository<T> : IDisposable, IInformaticsGatewayRepository<T> where T : class
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{

‎src/Database/Sqlite/Migrations/20220203222116_R1_Initialize.Designer.cs renamed to ‎src/Database/EntityFramework/Migrations/20220203222116_R1_Initialize.Designer.cs

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‎src/Database/Sqlite/Migrations/20220203222116_R1_Initialize.cs renamed to ‎src/Database/EntityFramework/Migrations/20220203222116_R1_Initialize.cs

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‎src/Database/Sqlite/Migrations/20220211175051_R1_Patch.Designer.cs renamed to ‎src/Database/EntityFramework/Migrations/20220211175051_R1_Patch.Designer.cs

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‎src/Database/Sqlite/Migrations/20220211175051_R1_Patch.cs renamed to ‎src/Database/EntityFramework/Migrations/20220211175051_R1_Patch.cs

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‎src/Database/Sqlite/Migrations/20220613235333_R2_0.2.0.Designer.cs renamed to ‎src/Database/EntityFramework/Migrations/20220613235333_R2_0.2.0.Designer.cs

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‎src/Database/Sqlite/Migrations/20220613235333_R2_0.2.0.cs renamed to ‎src/Database/EntityFramework/Migrations/20220613235333_R2_0.2.0.cs

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‎src/Database/Sqlite/Migrations/20220802200605_R3_0.3.0.Designer.cs renamed to ‎src/Database/EntityFramework/Migrations/20220802200605_R3_0.3.0.Designer.cs

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‎src/Database/Sqlite/Migrations/20220802200605_R3_0.3.0.cs renamed to ‎src/Database/EntityFramework/Migrations/20220802200605_R3_0.3.0.cs

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‎src/Database/Sqlite/Migrations/20221010184458_R3_0.3.2.Designer.cs renamed to ‎src/Database/EntityFramework/Migrations/20221010184458_R3_0.3.2.Designer.cs

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‎src/Database/Sqlite/Migrations/20221010184458_R3_0.3.2.cs renamed to ‎src/Database/EntityFramework/Migrations/20221010184458_R3_0.3.2.cs

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‎src/Database/Sqlite/Migrations/InformaticsGatewayContextModelSnapshot.cs renamed to ‎src/Database/EntityFramework/Migrations/InformaticsGatewayContextModelSnapshot.cs

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using Microsoft.EntityFrameworkCore;
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using Microsoft.EntityFrameworkCore.Infrastructure;
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using Microsoft.EntityFrameworkCore.Storage.ValueConversion;
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using Monai.Deploy.InformaticsGateway.Database.Sqlite;
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using Monai.Deploy.InformaticsGateway.Database.EntityFramework;
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#nullable disable
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‎src/Database/Sqlite/Monai.Deploy.InformaticsGateway.Database.Sqlite.csproj renamed to ‎src/Database/EntityFramework/Monai.Deploy.InformaticsGateway.Database.EntityFramework.csproj

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<!--
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<!--
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~ Copyright 2021-2022 MONAI Consortium
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~
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~ Licensed under the Apache License, Version 2.0 (the "License");
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<Project Sdk="Microsoft.NET.Sdk">
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<PropertyGroup>
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<RootNamespace>Monai.Deploy.InformaticsGateway.Database.Sqlite</RootNamespace>
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<RootNamespace>Monai.Deploy.InformaticsGateway.Database.EntityFramework</RootNamespace>
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<TargetFramework>net6.0</TargetFramework>
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<PackageLicenseExpression>Apache-2.0</PackageLicenseExpression>
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<ImplicitUsings>enable</ImplicitUsings>
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<ProjectReference Include="..\..\Api\Monai.Deploy.InformaticsGateway.Api.csproj" />
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<ProjectReference Include="..\..\Configuration\Monai.Deploy.InformaticsGateway.Configuration.csproj" />
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<ProjectReference Include="..\Api\Monai.Deploy.InformaticsGateway.Database.Api.csproj" />
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<ProjectReference Include="..\Repositories\Monai.Deploy.InformaticsGateway.Database.Api.csproj" />
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</ItemGroup>
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</Project>

‎src/Database/Monai.Deploy.InformaticsGateway.Database.csproj

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<ProjectReference Include="..\Api\Monai.Deploy.InformaticsGateway.Api.csproj" />
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<ProjectReference Include="..\Configuration\Monai.Deploy.InformaticsGateway.Configuration.csproj" />
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<ProjectReference Include="Api\Monai.Deploy.InformaticsGateway.Database.Api.csproj" />
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<ProjectReference Include="Sqlite\Monai.Deploy.InformaticsGateway.Database.Sqlite.csproj" />
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<ProjectReference Include="EntityFramework\Monai.Deploy.InformaticsGateway.Database.EntityFramework.csproj" />
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</ItemGroup>
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<ItemGroup>
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<Compile Remove="Sqlite\**" />
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<EmbeddedResource Remove="Sqlite\**" />
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<None Remove="Sqlite\**" />
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<Compile Remove="EntityFramework\**" />
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<EmbeddedResource Remove="EntityFramework\**" />
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<None Remove="EntityFramework\**" />
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</ItemGroup>
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<ItemGroup>

‎src/InformaticsGateway/Monai.Deploy.InformaticsGateway.csproj

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<!--
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<!--
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~ Copyright 2022 MONAI Consortium
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~
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~ Licensed under the Apache License, Version 2.0 (the "License");
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<ProjectReference Include="..\Api\Monai.Deploy.InformaticsGateway.Api.csproj" />
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<ProjectReference Include="..\Common\Monai.Deploy.InformaticsGateway.Common.csproj" />
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<ProjectReference Include="..\Configuration\Monai.Deploy.InformaticsGateway.Configuration.csproj" />
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<ProjectReference Include="..\Database\EntityFramework\Monai.Deploy.InformaticsGateway.Database.EntityFramework.csproj" />
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<ProjectReference Include="..\Database\Monai.Deploy.InformaticsGateway.Database.csproj" />
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<ProjectReference Include="..\Database\Sqlite\Monai.Deploy.InformaticsGateway.Database.Sqlite.csproj" />
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<ProjectReference Include="..\DicomWebClient\Monai.Deploy.InformaticsGateway.DicomWeb.Client.csproj" />
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</ItemGroup>
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‎src/InformaticsGateway/Program.cs

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using Monai.Deploy.InformaticsGateway.Common;
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using Monai.Deploy.InformaticsGateway.Configuration;
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using Monai.Deploy.InformaticsGateway.Database;
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using Monai.Deploy.InformaticsGateway.Database.Api;
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using Monai.Deploy.InformaticsGateway.Database.Sqlite;
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using Monai.Deploy.InformaticsGateway.Repositories;
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using Monai.Deploy.InformaticsGateway.Services.Common;
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using Monai.Deploy.InformaticsGateway.Services.Connectors;
@@ -112,7 +110,6 @@ internal static IHostBuilder CreateHostBuilder(string[] args) =>
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services.AddTransient<IStreamsWriter, StreamsWriter>();
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services.AddTransient<IApplicationEntityHandler, ApplicationEntityHandler>();
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services.AddScoped(typeof(IInformaticsGatewayRepository<>), typeof(InformaticsGatewayRepository<>));
116113
services.AddScoped<IStorageMetadataWrapperRepository, StorageMetadataWrapperRepository>();
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services.AddScoped<IInferenceRequestRepository, InferenceRequestRepository>();
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services.AddScoped<IPayloadMoveActionHandler, PayloadMoveActionHandler>();

‎src/InformaticsGateway/Services/Http/Startup.cs

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using Microsoft.Extensions.DependencyInjection;
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using Microsoft.Extensions.Hosting;
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using Microsoft.OpenApi.Models;
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using Monai.Deploy.InformaticsGateway.Database.Sqlite;
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using Monai.Deploy.InformaticsGateway.Database.EntityFramework;
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using Monai.Deploy.InformaticsGateway.Services.Fhir;
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namespace Monai.Deploy.InformaticsGateway.Services.Http

‎src/InformaticsGateway/Test/Monai.Deploy.InformaticsGateway.Test.csproj

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<ItemGroup>
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<ProjectReference Include="..\..\Api\Monai.Deploy.InformaticsGateway.Api.csproj" />
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<ProjectReference Include="..\..\Database\Sqlite\Monai.Deploy.InformaticsGateway.Database.Sqlite.csproj" />
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<ProjectReference Include="..\..\Database\EntityFramework\Monai.Deploy.InformaticsGateway.Database.EntityFramework.csproj" />
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<ProjectReference Include="..\Monai.Deploy.InformaticsGateway.csproj" />
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</ItemGroup>
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‎src/InformaticsGateway/Test/Repositories/InformaticsGatewayRepositoryTest.cs

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using Microsoft.EntityFrameworkCore;
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using Microsoft.Extensions.DependencyInjection;
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using Monai.Deploy.InformaticsGateway.Api;
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using Monai.Deploy.InformaticsGateway.Database.Sqlite;
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using Monai.Deploy.InformaticsGateway.Repositories;
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using Monai.Deploy.InformaticsGateway.Database.EntityFramework;
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using Moq;
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using xRetry;
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using Xunit;

‎src/Monai.Deploy.InformaticsGateway.sln

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EndProject
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Project("{9A19103F-16F7-4668-BE54-9A1E7A4F7556}") = "Monai.Deploy.InformaticsGateway.DicomWeb.Client.CLI", "DicomWebClient\CLI\Monai.Deploy.InformaticsGateway.DicomWeb.Client.CLI.csproj", "{689E0066-81DA-4602-B058-D93389DF5DBD}"
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EndProject
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Project("{9A19103F-16F7-4668-BE54-9A1E7A4F7556}") = "Monai.Deploy.InformaticsGateway.Database.Sqlite", "Database\Sqlite\Monai.Deploy.InformaticsGateway.Database.Sqlite.csproj", "{313B68CE-A0DB-4DE2-8359-AC777F5997FE}"
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Project("{9A19103F-16F7-4668-BE54-9A1E7A4F7556}") = "Monai.Deploy.InformaticsGateway.Database.EntityFramework", "Database\EntityFramework\Monai.Deploy.InformaticsGateway.Database.EntityFramework.csproj", "{313B68CE-A0DB-4DE2-8359-AC777F5997FE}"
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EndProject
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Project("{9A19103F-16F7-4668-BE54-9A1E7A4F7556}") = "Monai.Deploy.InformaticsGateway.Database.Api", "Database\Api\Monai.Deploy.InformaticsGateway.Database.Api.csproj", "{366CA24C-B546-46AD-8607-AABE4F0F4864}"
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EndProject

‎tests/Integration.Test/Hooks/SqlHooks.cs

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using Microsoft.EntityFrameworkCore;
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using Monai.Deploy.InformaticsGateway.Api.Rest;
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using Monai.Deploy.InformaticsGateway.Database.Sqlite;
19+
using Monai.Deploy.InformaticsGateway.Database.EntityFramework;
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using Monai.Deploy.InformaticsGateway.Integration.Test.Drivers;
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using Monai.Deploy.InformaticsGateway.Integration.Test.StepDefinitions;
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using TechTalk.SpecFlow.Infrastructure;

‎tests/Integration.Test/Monai.Deploy.InformaticsGateway.Integration.Test.csproj

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<ProjectReference Include="..\..\src\Api\Monai.Deploy.InformaticsGateway.Api.csproj" />
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<ProjectReference Include="..\..\src\Client\Monai.Deploy.InformaticsGateway.Client.csproj" />
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<ProjectReference Include="..\..\src\Configuration\Monai.Deploy.InformaticsGateway.Configuration.csproj" />
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<ProjectReference Include="..\..\src\Database\EntityFramework\Monai.Deploy.InformaticsGateway.Database.EntityFramework.csproj" />
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<ProjectReference Include="..\..\src\Database\Monai.Deploy.InformaticsGateway.Database.csproj" />
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<ProjectReference Include="..\..\src\Database\Sqlite\Monai.Deploy.InformaticsGateway.Database.Sqlite.csproj" />
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<ProjectReference Include="..\..\src\Database\Sqlite\Monai.Deploy.InformaticsGateway.Database.EntityFramework.csproj" />
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<ProjectReference Include="..\..\src\DicomWebClient\Monai.Deploy.InformaticsGateway.DicomWeb.Client.csproj" />
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</ItemGroup>
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