update according to the guide

Signed-off-by: Wenqi Li <[email protected]>

Author: wyli

model_zoo/TCIA_PROSTATEx_Prostate_MRI_Anatomy_Model.ipynb

@@ -79,23 +79,14 @@
    "source": [
     "# 1. Setup\n",
     "\n",
-    "These are the initial steps for running notebooks within various Jupyter environments.\n",
-    "\n",
-    "## Setup environment"
+    "These are the initial steps for running notebooks within various Jupyter environments."
    ]
   },
   {
-   "cell_type": "code",
-   "execution_count": null,
-   "metadata": {
-    "id": "XFhjBkS35hYN"
-   },
-   "outputs": [],
+   "cell_type": "markdown",
+   "metadata": {},
    "source": [
-    "import os\n",
-    "\n",
-    "# Upgrade pip, just in case.\n",
-    "!python -m pip install --upgrade -q pip"
+    "## Setup environment"
    ]
   },
   {
@@ -112,6 +103,9 @@
     "#   such as voxel image, image orientation, and image directions,\n",
     "#   which are critical to image processing and display.\n",
     "\n",
+    "# Upgrade pip, just in case.\n",
+    "!python -m pip install --upgrade -q pip\n",
+    "\n",
     "# installations required for monai\n",
     "!python -c \"import monai\" || pip install -q \"monai[nibabel,itk,tqdm,pandas,skimage]\"\n",
     "\n",
@@ -141,6 +135,7 @@
    "outputs": [],
    "source": [
     "import glob\n",
+    "import os\n",
     "\n",
     "# Numpy for numpy.arrays\n",
     "import numpy as np\n",
@@ -163,7 +158,11 @@
     "# imports for monai\n",
     "import torch\n",
     "from monai.data import decollate_batch\n",
-    "from monai.bundle import ConfigParser, download"
+    "from monai.bundle import ConfigParser, download\n",
+    "\n",
+    "from monai.config import print_config\n",
+    "\n",
+    "print_config()"
    ]
   },
   {