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simplify dataset tutorials (#13)
remove duplication of tutorials regarding datasets
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README.md

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@@ -26,8 +26,8 @@ This tutorial shows how to apply the automatic mixed precision(AMP) feature of P
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And compares the training speed and memory usage with/without AMP.
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#### [brats_segmentation_3d](./brats_segmentation_3d.ipynb)
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This tutorial shows how to construct a training workflow of multi-labels segmentation task based on [MSD Brain Tumor dataset](http://medicaldecathlon.com).
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#### [cache_dataset_speed](./cache_dataset_speed.ipynb)
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This tutorial shows how to accelerate PyTorch medical DL program based on MONAI `CacheDataset`.
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#### [dataset_type_performance](./dataset_type_performance.ipynb)
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This notebook compares the performance of `Dataset`, `CacheDataset` and `PersistentDataset`. These classes differ in how data is stored (in memory or on disk), and at which moment transforms are applied.
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#### [integrate_3rd_party_transforms](./integrate_3rd_party_transforms.ipynb)
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This tutorial shows how to integrate 3rd party transforms into MONAI program.
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Mainly shows transforms from BatchGenerator, TorchIO, Rising and ITK.
@@ -46,10 +46,6 @@ This tutorial shows how to leverage `EnsembleEvaluator`, `MeanEnsemble` and `Vot
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This notebook is a quick demo for devices, run the Ignite trainer engine on CPU, GPU and multiple GPUs.
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#### [nifti_read_example](./nifti_read_example.ipynb)
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Illustrate reading NIfTI files and iterating over image patches of the volumes loaded from them.
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#### [persistent_dataset_speed](./persistent_dataset_speed.ipynb)
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This notebook shows `PersistentDataset` that processes original data sources through the non-random transforms on first use.
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And stores these intermediate tensor values to an on-disk persistence representation.
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The intermediate processed tensors are loaded from disk on each use for processing by the random-transforms for each analysis request.
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#### [post_transforms](./post_transforms.ipynb)
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This notebook shows the usage of several post transforms based on the model output of spleen segmentation task.
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#### [public_datasets](./public_datasets.ipynb)

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