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update visualization in resample benchmark #1052

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Merged
merged 1 commit into from
Nov 17, 2022
Merged

update visualization in resample benchmark #1052

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24 changes: 12 additions & 12 deletions modules/resample_benchmark.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -30,7 +30,7 @@
},
"outputs": [],
"source": [
"!pip install -q ipywidgets==7.6\n",
"!pip install -q ipywidgets\n",
"!python -c \"import monai\" || pip install -q \"monai-weekly[nibabel]\"\n",
"import monai\n",
"from monai.apps.utils import download_url\n",
Expand All @@ -48,8 +48,7 @@
"import numpy as np\n",
"\n",
"%matplotlib inline\n",
"from matplotlib import pyplot as plt\n",
"from ipywidgets import interact, fixed"
"from matplotlib import pyplot as plt"
]
},
{
Expand Down Expand Up @@ -240,14 +239,15 @@
" plt.show()\n",
"\n",
"\n",
"# generate the interactive display\n",
"interact(\n",
" transformation_display,\n",
" img_path=fixed(f\"{root_dir}/SimpleITK.jpg\"),\n",
" tx=(-128.0, 128.0, 2.0),\n",
" ty=(-64.0, 64.0),\n",
" theta=(-np.pi/4.0, np.pi/4.0)\n",
")"
"# # umcomment the following to generate the interactive display\n",
"# from ipywidgets import interact, fixed\n",
"# interact(\n",
"# transformation_display,\n",
"# img_path=fixed(f\"{root_dir}/SimpleITK.jpg\"),\n",
"# tx=(-128.0, 128.0, 2.0),\n",
"# ty=(-64.0, 64.0),\n",
"# theta=(-np.pi/4.0, np.pi/4.0)\n",
"# )"
]
},
{
Expand Down Expand Up @@ -689,7 +689,7 @@
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.8.0"
"version": "3.8.13"
},
"widgets": {
"application/vnd.jupyter.widget-state+json": {
Expand Down