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Fixes attempt to access removed .factories attribute #1558

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Merged
merged 1 commit into from
Oct 30, 2023
Merged

Fixes attempt to access removed .factories attribute #1558

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105 changes: 73 additions & 32 deletions modules/UNet_input_size_constraints.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -36,7 +36,7 @@
},
{
"cell_type": "code",
"execution_count": 19,
"execution_count": 1,
"id": "efcd04b9",
"metadata": {},
"outputs": [],
Expand All @@ -55,10 +55,54 @@
},
{
"cell_type": "code",
"execution_count": 20,
"execution_count": 2,
"id": "86ee1f12",
"metadata": {},
"outputs": [],
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"IProgress not found. Please update jupyter and ipywidgets. See https://ipywidgets.readthedocs.io/en/stable/user_install.html\n"
]
},
{
"name": "stdout",
"output_type": "stream",
"text": [
"MONAI version: 0+untagged.2891.gccd32ca\n",
"Numpy version: 1.25.1\n",
"Pytorch version: 2.0.1\n",
"MONAI flags: HAS_EXT = False, USE_COMPILED = False, USE_META_DICT = False\n",
"MONAI rev id: ccd32ca5e9e84562d2f388b45b6724b5c77c1f57\n",
"MONAI __file__: /Users/<username>/Envs/monai/lib/python3.9/site-packages/monai/__init__.py\n",
"\n",
"Optional dependencies:\n",
"Pytorch Ignite version: 0.4.11\n",
"ITK version: 5.3.0\n",
"Nibabel version: 5.1.0\n",
"scikit-image version: 0.21.0\n",
"scipy version: 1.11.1\n",
"Pillow version: 10.0.0\n",
"Tensorboard version: 2.13.0\n",
"gdown version: 4.7.1\n",
"TorchVision version: 0.15.2\n",
"tqdm version: 4.65.0\n",
"lmdb version: 1.4.1\n",
"psutil version: 5.9.5\n",
"pandas version: 2.0.3\n",
"einops version: 0.6.1\n",
"transformers version: 4.21.3\n",
"mlflow version: 2.4.2\n",
"pynrrd version: 1.0.0\n",
"clearml version: 1.11.2rc0\n",
"\n",
"For details about installing the optional dependencies, please visit:\n",
" https://docs.monai.io/en/latest/installation.html#installing-the-recommended-dependencies\n",
"\n"
]
}
],
"source": [
"from monai.networks.nets import UNet\n",
"import monai\n",
Expand Down Expand Up @@ -91,7 +135,7 @@
},
{
"cell_type": "code",
"execution_count": 21,
"execution_count": 3,
"id": "fd05bcb4",
"metadata": {},
"outputs": [
Expand Down Expand Up @@ -152,7 +196,7 @@
")"
]
},
"execution_count": 21,
"execution_count": 3,
"metadata": {},
"output_type": "execute_result"
}
Expand Down Expand Up @@ -247,7 +291,7 @@
},
{
"cell_type": "code",
"execution_count": 22,
"execution_count": 4,
"id": "37f7e0e6",
"metadata": {},
"outputs": [],
Expand All @@ -271,7 +315,7 @@
},
{
"cell_type": "code",
"execution_count": 23,
"execution_count": 5,
"id": "0d5b0d70",
"metadata": {},
"outputs": [
Expand All @@ -291,7 +335,7 @@
},
{
"cell_type": "code",
"execution_count": 24,
"execution_count": 6,
"id": "3b1b4388",
"metadata": {},
"outputs": [
Expand Down Expand Up @@ -329,7 +373,7 @@
},
{
"cell_type": "code",
"execution_count": 25,
"execution_count": 7,
"id": "caece123",
"metadata": {},
"outputs": [
Expand All @@ -348,7 +392,7 @@
},
{
"cell_type": "code",
"execution_count": 26,
"execution_count": 8,
"id": "f67804d2",
"metadata": {},
"outputs": [
Expand Down Expand Up @@ -382,23 +426,20 @@
},
{
"cell_type": "code",
"execution_count": 27,
"execution_count": 9,
"id": "dc4be9d5",
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"dict_keys(['INSTANCE', 'BATCH', 'GROUP', 'LAYER', 'LOCALRESPONSE', 'SYNCBATCH'])"
]
},
"execution_count": 27,
"metadata": {},
"output_type": "execute_result"
"name": "stdout",
"output_type": "stream",
"text": [
"('INSTANCE', 'BATCH', 'INSTANCE_NVFUSER', 'GROUP', 'LAYER', 'LOCALRESPONSE', 'SYNCBATCH')\n"
]
}
],
"source": [
"monai.networks.layers.factories.Norm.factories.keys()"
"print(monai.networks.layers.factories.Norm.names)"
]
},
{
Expand Down Expand Up @@ -428,7 +469,7 @@
},
{
"cell_type": "code",
"execution_count": 28,
"execution_count": 10,
"id": "732f2769",
"metadata": {},
"outputs": [],
Expand Down Expand Up @@ -461,7 +502,7 @@
},
{
"cell_type": "code",
"execution_count": 29,
"execution_count": 11,
"id": "0a33cc15",
"metadata": {},
"outputs": [],
Expand All @@ -486,17 +527,17 @@
},
{
"cell_type": "code",
"execution_count": 30,
"execution_count": 12,
"id": "23d75904",
"metadata": {},
"outputs": [
{
"data": {
"text/plain": [
"tensor([[[[[-0.7587]]]]])"
"tensor([[[[[-0.6150]]]]])"
]
},
"execution_count": 30,
"execution_count": 12,
"metadata": {},
"output_type": "execute_result"
}
Expand Down Expand Up @@ -636,7 +677,7 @@
},
{
"cell_type": "code",
"execution_count": 31,
"execution_count": 13,
"id": "1bdc5c8e",
"metadata": {},
"outputs": [
Expand Down Expand Up @@ -671,7 +712,7 @@
},
{
"cell_type": "code",
"execution_count": 32,
"execution_count": 14,
"id": "7485a83a",
"metadata": {},
"outputs": [
Expand Down Expand Up @@ -702,7 +743,7 @@
},
{
"cell_type": "code",
"execution_count": 33,
"execution_count": 15,
"id": "6a31861f",
"metadata": {},
"outputs": [
Expand Down Expand Up @@ -770,7 +811,7 @@
},
{
"cell_type": "code",
"execution_count": 34,
"execution_count": 16,
"id": "d234f140",
"metadata": {},
"outputs": [
Expand Down Expand Up @@ -806,7 +847,7 @@
},
{
"cell_type": "code",
"execution_count": 35,
"execution_count": 17,
"id": "ccf53aa1",
"metadata": {},
"outputs": [
Expand Down Expand Up @@ -842,7 +883,7 @@
},
{
"cell_type": "code",
"execution_count": 36,
"execution_count": 18,
"id": "da6e9277",
"metadata": {},
"outputs": [
Expand Down Expand Up @@ -894,7 +935,7 @@
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.8.10"
"version": "3.9.16"
}
},
"nbformat": 4,
Expand Down
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