Add DeepEdit Bundle

[diazandr3s]

Signed-off-by: Andres Diaz-Pinto [email protected]

DeepEdit Bundle

[diazandr3s]

@Nic-Ma how I can send a dictionary to a transform?

When using this transform here

https://github.com/Project-MONAI/MONAI/blob/dev/monai/apps/deepedit/transforms.py#L101

I'm getting this error:

for idx, (key_label, val_label) in enumerate(self.label_names.items(), start=1):

AttributeError: 'str' object has no attribute 'items'

It seems the transform is getting a str instead of a dictionary :/

[Nic-Ma]

@Nic-Ma how I can send a dictionary to a transform?

When using this transform here

https://github.com/Project-MONAI/MONAI/blob/dev/monai/apps/deepedit/transforms.py#L101

I'm getting this error:

for idx, (key_label, val_label) in enumerate(self.label_names.items(), start=1):

AttributeError: 'str' object has no attribute 'items'

It seems the transform is getting a str instead of a dictionary :/

Hi @diazandr3s ,

I think you should define the label_names as a dict in the JSON config instead of a string. For example:

"label_names": {"spleen": 1, "background": 0}

Thanks.

[diazandr3s]

Closing this PR.
A new one has been created here: Project-MONAI/model-zoo#3