Fix several small issues with the template:

1. Fix links from the table of tables
2. Hide horizontal rules in tables
3. Fix overhang issue (note: this required disabling full-justification)

Author: chrisfenner

Dockerfile

@@ -1,10 +1,5 @@
-FROM pandoc/latex:2.19
+FROM pandoc/latex:3.1.1
 
-COPY ./img/* /resources/img/
-COPY ./template/* /resources/templates/
-COPY ./filter/* /resources/filters/
-
-RUN tlmgr list
 RUN tlmgr update --self && \
     tlmgr install \
     merriweather \
@@ -37,7 +32,8 @@ RUN tlmgr update --self && \
     transparent \
     ulem \
     hardwrap \
-    catchfile
+    catchfile \
+    ragged2e
 
 RUN apk upgrade && apk add --no-cache \
     bash \
@@ -56,7 +52,7 @@ RUN pip install pandocfilters
 ENV PUPPETEER_SKIP_CHROMIUM_DOWNLOAD=true \
     PUPPETEER_EXECUTABLE_PATH=/usr/bin/chromium-browser
 
-RUN npm install --global --unsafe-perm [email protected] puppeteer@16.1.0 [email protected] [email protected] typescript@4.7.4
+RUN npm install --global --unsafe-perm [email protected] puppeteer@19.8.5 [email protected] [email protected] typescript@5.0.4
 
 # Install latest pandiff, which has not been released in a while
 # This pre-release build has --reference-doc support for docx output
@@ -66,6 +62,10 @@ RUN cd /src/pandiff && git checkout d1d468b2c4d81c622ff431ef718b1bf0daaa03db
 RUN cd /src/pandiff && npm install @types/node --save-dev
 RUN npm install --global /src/pandiff
 
+COPY ./img/* /resources/img/
+COPY ./template/* /resources/templates/
+COPY ./filter/* /resources/filters/
+
 # mktexpk gets executed and needs a home dir, build one
 RUN mkdir -m 0777 /home/user
 ENV HOME="/home/user"

build.sh

@@ -242,9 +242,9 @@ sed 's/```mermaid *{/```{.mermaid /g' "${input_file}" > "${build_dir}/${input_fi
 sed 's/^---$/\\newpage/g;1s/\\newpage/---/g' "${build_dir}/${input_file}.1" > "${build_dir}/${input_file}.2"
 
 # Transform 3
-# Transform sections before the table of contents into addsec, which does not number them.
+# Transform sections before the table of contents into section*, which does not number them.
 # While we're doing this, transform the case to all-caps.
-sed '0,/\\tableofcontents/s/^# \(.*\)/\\addsec\{\U\1\}/g' "${build_dir}/${input_file}.2" > "${build_dir}/${input_file}.3"
+sed '0,/\\tableofcontents/s/^# \(.*\)/\\section*\{\U\1\}/g' "${build_dir}/${input_file}.2" > "${build_dir}/${input_file}.3"
 
 # Grab the date from the front matter and generate the full date and year.
 DATE="$(grep date: "${input_file}" | head -n 1 | cut -d ' ' -f 2)"

sample1.md

@@ -138,3 +138,52 @@ Table: Fantastic Table
 | **Column 1** | **Column 2** | **Column 3** |
 | ------------ | ------------ | ------------ |
 | AAAAAAAA     | BBBBBBBB     | CCCCCCCC     |
+
+> Table: Informative Table
+>
+> | **Column 1** | **Column 2** | **Column 3** |
+> | ------------ | ------------ | ------------ |
+> | AAAAAAAA     | BBBBBBBB     | CCCCCCCC     |
+> | DDDDDDDD     | EEEEEEEE     | FFFFFFFF     |
+>
+
+# References
+
+[1] Trusted Computing Group, "DICE Protection Environment," 2023. [Online].
+    Available: https://trustedcomputinggroup.org.
+
+[2] Trusted Computing Group, "DICE Certificate Profiles," 2020. [Online].
+    Available: https://trustedcomputinggroup.org.
+
+[3] Internet Engineering Task Force, "Cryptographic Message Syntax (CMS)," 2009. [Online].
+    Avilable: https://www.ietf.org/rfc/rfc5652.txt
+
+[4] Internet Engineering Task Force, "PKCS #10: Certification Request Syntax Specification Version 1.7," 2000. [Online].
+    Avilable: https://www.ietf.org/rfc/rfc2986.txt
+
+
+Trusted Computing Group, "DICE Protection Environment," 2023. [Online].
+    Available: https://trustedcomputinggroup.org.
+
+Trusted Computing Group, "DICE Certificate Profiles," 2020. [Online].
+    Available: https://trustedcomputinggroup.org.
+
+Internet Engineering Task Force, "Cryptographic Message Syntax (CMS)," 2009. [Online].
+    Avilable: https://www.ietf.org/rfc/rfc5652.txt
+
+Internet Engineering Task Force, "PKCS #10: Certification Request Syntax Specification Version 1.7," 2000. [Online].
+    Avilable: https://www.ietf.org/rfc/rfc2986.txt
+
+> 
+> Trusted Computing Group, "DICE Protection Environment," 2023. [Online].
+>     Available: https://trustedcomputinggroup.org.
+> 
+> Trusted Computing Group, "DICE Certificate Profiles," 2020. [Online].
+>     Available: https://trustedcomputinggroup.org.
+>
+> Internet Engineering Task Force, "Cryptographic Message Syntax (CMS)," 2009. [Online].
+>     Avilable: https://www.ietf.org/rfc/rfc5652.txt
+>
+> Internet Engineering Task Force, "PKCS #10: Certification Request Syntax Specification Version 1.7," 2000. [Online].
+>     Avilable: https://www.ietf.org/rfc/rfc2986.txt
+>

template/eisvogel.latex

@@ -342,6 +342,11 @@ $highlighting-macros$
 \usepackage{fvextra}
 \DefineVerbatimEnvironment{Highlighting}{Verbatim}{breaklines,fontsize=$if(code-block-font-size)$$code-block-font-size$$else$\small$endif$,commandchars=\\\{\}}
 
+% Left-justify the document.
+\usepackage[document]{ragged2e}
+\RaggedRight
+\sloppy
+
 $endif$
 $if(tables)$
 \usepackage{longtable,booktabs,array}
@@ -366,20 +371,6 @@ $else$
 \makesavenoteenv{longtable}
 $endif$
 $endif$
-% Workaround for the fact that longtable increments the table counter
-% even when there is no caption.
-% Source: https://tex.stackexchange.com/a/106191
-\usepackage{etoolbox}
-\makeatletter
-\newif\ifLT@nocaption
-\preto\longtable{\LT@nocaptiontrue}
-\appto\endlongtable{%
-  \ifLT@nocaption
-    \addtocounter{table}{\m@ne}%
-  \fi}
-\preto\LT@caption{%
-  \noalign{\global\LT@nocaptionfalse}}
-\makeatother
 % add backlinks to footnote references, cf. https://tex.stackexchange.com/questions/302266/make-footnote-clickable-both-ways
 $if(footnotes-disable-backlinks)$
 $else$
@@ -709,7 +700,9 @@ $if(tables)$
 \definecolor{table-rule-color}{HTML}{FFFFFF}
 
 \arrayrulecolor{table-rule-color}     % color of \toprule, \midrule, \bottomrule
-\setlength\heavyrulewidth{0.3ex} % thickness of \toprule, \bottomrule
+\setlength\heavyrulewidth{0em} % thickness of \toprule, \bottomrule
+\setlength\lightrulewidth{0em} % thickness of \midrule
+\setlength\arrayrulewidth{0em} % thickness of array rules
 \renewcommand{\arraystretch}{1.3}     % spacing (padding)
 
 $if(table-use-row-colors)$
@@ -1117,7 +1110,7 @@ $if(beamer)$
 $if(toc-title)$
   \frametitle{$toc-title$}
 $endif$
-  \tableofcontents[hideallsubsections]
+\tableofcontents[hideallsubsections]
 \end{frame}
 $if(toc-own-page)$
 \newpage