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Merge pull request #250 from common-workflow-language/draft-4-to-v1.0
Draft 4 to v1.0
2 parents ce19b18 + b4de02d commit 3c40bd3

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280 files changed

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‎draft-4/CommandLineTool-standalone.yml renamed to ‎v1.0/CommandLineTool-standalone.yml

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‎draft-4/CommandLineTool.yml renamed to ‎v1.0/CommandLineTool.yml

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‎draft-4/CommonWorkflowLanguage.yml renamed to ‎v1.0/CommonWorkflowLanguage.yml

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‎draft-4/Process.yml renamed to ‎v1.0/Process.yml

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- cwl:draft-4.dev1
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- cwl:v1.0.dev4
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- name: CWLType
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type: enum
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jsonldPredicate: "rdfs:comment"
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doc: "A long, human-readable description of this process object."
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- name: cwlVersion
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type:
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- CWLVersions
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doc: "CWL document version"
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type: CWLVersions?
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doc: |
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CWL document version. Always required at the document root. Not
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required for a Process embedded inside another Process.
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jsonldPredicate:
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"_id": "cwl:cwlVersion"
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"_type": "@vocab"

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#!/usr/bin/env cwl-runner
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#!/usr/bin/env cwl-runner
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#!/usr/bin/env cwl-runner
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{
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"class": "CommandLineTool",
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"cwlVersion": "cwl:draft-4.dev3",
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"cwlVersion": "v1.0.dev4",
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"description": "Print the contents of a file to stdout using 'cat' running in a docker container.",
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"inputs": [
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#!/usr/bin/env cwl-runner
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class: CommandLineTool
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description: "Print the contents of a file to stdout using 'cat' running in a docker container."
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#!/usr/bin/env cwl-runner
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description: "Print the contents of a file to stdout using 'cat' running in a docker container."
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#!/usr/bin/env cwl-runner
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#!/usr/bin/env cwl-runner
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#!/usr/bin/env cwl-runner
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#!/usr/bin/env cwl-runner
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#!/usr/bin/env cwl-runner
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class: CommandLineTool
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$graph:
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- id: echo
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class: CommandLineTool

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#!/usr/bin/env cwl-runner
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class: Workflow
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#!/usr/bin/env cwl-runner
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#!/usr/bin/env cwl-runner
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#!/usr/bin/env cwl-runner
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- class: MultipleInputFeatureRequirement

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baseCommand: [tar, xvf]
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$namespaces:
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class: ExpressionTool
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requirements:
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- class: InlineJavascriptRequirement
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cwlVersion: cwl:draft-4.dev3
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cwlVersion: v1.0.dev4
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inputs:
99
i1:

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class: ExpressionTool
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requirements:
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- class: InlineJavascriptRequirement
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cwlVersion: cwl:draft-4.dev3
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cwlVersion: v1.0.dev4
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inputs:
99
i1: Any

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#!/usr/bin/env cwl-runner
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class: CommandLineTool
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cwlVersion: "cwl:draft-4.dev3"
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cwlVersion: "v1.0.dev4"
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description: "Print the contents of a file to stdout using 'cat' running in a docker container."
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hints:
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DockerRequirement:

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class: CommandLineTool
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cwlVersion: cwl:draft-4.dev3
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cwlVersion: v1.0.dev4
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inputs:
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bar:
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type: Any

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class: CommandLineTool
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cwlVersion: cwl:draft-4.dev3
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cwlVersion: v1.0.dev4
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requirements:
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- class: InlineJavascriptRequirement
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class: ExpressionTool
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requirements:
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- class: InlineJavascriptRequirement
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cwlVersion: cwl:draft-4.dev3
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cwlVersion: v1.0.dev4
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inputs:
99
file1:

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class: CommandLineTool
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cwlVersion: cwl:draft-4.dev3
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cwlVersion: v1.0.dev4
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requirements:
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- class: ShellCommandRequirement
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inputs:

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class: CommandLineTool
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cwlVersion: cwl:draft-4.dev3
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cwlVersion: v1.0.dev4
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baseCommand: "true"
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requirements:
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InitialWorkDirRequirement:

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#
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class: Workflow
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description: "Reverse the lines in a document, then sort those lines."
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cwlVersion: cwl:draft-4.dev3
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cwlVersion: v1.0.dev4
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# Requirements & hints specify prerequisites and extensions to the workflow.
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# In this example, DockerRequirement specifies a default Docker container

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