turn off shell quoting for stderr tests

Author: mr-c

v1.0/v1.0/stderr-mediumcut.cwl

@@ -2,9 +2,14 @@
 class: CommandLineTool
 cwlVersion: v1.0
 doc: "Test of capturing stderr output in a docker container."
+requirements:
+  ShellCommandRequirement: {}
 inputs: []
 outputs:
   output_file:
     type: stderr
-baseCommand: [sh, -c, "echo foo 1>&2"]
+baseCommand: [sh]
+arguments:
+ - '-c'
+ - { valueFrom: "echo foo 1>&2", shellQuote: False }
 stderr: std.err

v1.0/v1.0/stderr-shortcut.cwl

@@ -2,8 +2,13 @@
 class: CommandLineTool
 cwlVersion: v1.0
 doc: "Test of capturing stderr output in a docker container."
+requirements:
+  ShellCommandRequirement: {}
 inputs: []
 outputs:
   output_file:
     type: stderr
-baseCommand: [sh, -c, "echo foo 1>&2"]
+baseCommand: [sh]
+arguments:
+ - '-c'
+ - { valueFrom: "echo foo 1>&2", shellQuote: False }

v1.0/v1.0/stderr.cwl

@@ -2,10 +2,15 @@
 class: CommandLineTool
 cwlVersion: v1.0
 doc: "Test of capturing stderr output in a docker container."
+requirements:
+  ShellCommandRequirement: {}
 inputs: []
 outputs:
   output_file:
     type: File
     outputBinding: {glob: error.txt}
-baseCommand: [sh, -c, "echo foo 1>&2"]
+baseCommand: [sh]
+arguments:
+ - '-c'
+ - { valueFrom: "echo foo 1>&2", shellQuote: False }
 stderr: error.txt