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lines changed Original file line number Diff line number Diff line change @@ -164,7 +164,7 @@ The easiest way to use cwltool to run a tool or workflow from Python is to use a
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Leveraging SoftwareRequirements (Beta)
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--------------------------------------
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- CWL tools may be decoarated with ``SoftwareRequirement `` hints that cwltool
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+ CWL tools may be decorated with ``SoftwareRequirement `` hints that cwltool
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may in turn use to resolve to packages in various package managers or
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dependency management systems such as `Environment Modules
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<http://modules.sourceforge.net/> `__.
@@ -193,8 +193,8 @@ following ``hint`` definition for an example CWL tool.
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- r93
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Now imagine deploying cwltool on a cluster with Software Modules installed
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- and that a ``seqtk `` module is avaialble at version ``r93 ``. This means cluster
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- users likely won't have the ``seqtk `` the binary on their ``PATH `` by default but after
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+ and that a ``seqtk `` module is available at version ``r93 ``. This means cluster
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+ users likely won't have the binary ``seqtk `` on their ``PATH `` by default, but after
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sourcing this module with the command ``modulecmd sh load seqtk/r93 `` ``seqtk `` is
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available on the ``PATH ``. A simple dependency resolvers configuration file, called
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``dependency-resolvers-conf.yml `` for instance, that would enable cwltool to source
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