correct error

Author: mr-c

cwltool/job.py

@@ -193,7 +193,7 @@ def run(self, dry_run=False, pull_image=True, rm_container=True,
 
             rcode = sp.wait()
 
-            if not isinstance(stdin, int):
+            if stdin != subprocess.PIPE:
                 stdin.close()
 
             if stdout is not sys.stderr:

cwltool/workflow.py

@@ -443,12 +443,8 @@ def __init__(self, toolpath_object, pos, **kwargs):
             runobj = None
             if isinstance(toolpath_object["run"], basestring):
                 runobj, _ = schema_salad.schema.load_and_validate(
-                    kwargs["loader"],
-                    kwargs[
-                        "avsc_names"],
-                    toolpath_object[
-                        "run"],
-                    True)
+                    kwargs["loader"], kwargs["avsc_names"],
+                    toolpath_object["run"], True)
             else:
                 runobj = toolpath_object["run"]
             self.embedded_tool = makeTool(runobj, **kwargs)