Undo pytables

Author: mroeschke

ci/deps/actions-310-minimum_versions.yaml

@@ -46,7 +46,7 @@ dependencies:
   - pymysql=1.1.0
   - pyqt=5.15.9
   - pyreadstat=1.2.6
-  - pytables=3.9.2
+  - pytables=3.8.0
   - python-calamine=0.1.7
   - pytz=2023.4
   - pyxlsb=1.0.10

ci/deps/actions-310.yaml

@@ -44,7 +44,7 @@ dependencies:
   - pymysql>=1.1.0
   - pyqt>=5.15.9
   - pyreadstat>=1.2.6
-  - pytables>=3.9.2
+  - pytables>=3.8.0
   - python-calamine>=0.1.7
   - pytz>=2023.4
   - pyxlsb>=1.0.10

ci/deps/actions-311-downstream_compat.yaml

@@ -45,7 +45,7 @@ dependencies:
   - pymysql>=1.1.0
   - pyqt>=5.15.9
   - pyreadstat>=1.2.6
-  - pytables>=3.9.2
+  - pytables>=3.8.0
   - python-calamine>=0.1.7
   - pytz>=2023.4
   - pyxlsb>=1.0.10

ci/deps/actions-311.yaml

@@ -44,7 +44,7 @@ dependencies:
   - pyarrow>=10.0.1
   - pymysql>=1.1.0
   - pyreadstat>=1.2.6
-  - pytables>=3.9.2
+  - pytables>=3.8.0
   - python-calamine>=0.1.7
   - pytz>=2023.4
   - pyxlsb>=1.0.10

ci/deps/actions-312.yaml

@@ -44,7 +44,7 @@ dependencies:
   - pyarrow>=10.0.1
   - pymysql>=1.1.0
   - pyreadstat>=1.2.6
-  - pytables>=3.9.2
+  - pytables>=3.8.0
   - python-calamine>=0.1.7
   - pytz>=2023.4
   - pyxlsb>=1.0.10

ci/deps/circle-311-arm64.yaml

@@ -44,7 +44,7 @@ dependencies:
   - pymysql>=1.1.0
   - pyqt>=5.15.9
   - pyreadstat>=1.2.6
-  - pytables>=3.9.2
+  - pytables>=3.8.0
   - python-calamine>=0.1.7
   - pytz>=2023.4
   - pyxlsb>=1.0.10

doc/source/getting_started/install.rst

@@ -304,7 +304,7 @@ Installable with ``pip install "pandas[hdf5, parquet, feather, spss, excel]"``
 ====================================================== ================== ================ ==========================================================
 Dependency                                             Minimum Version    pip extra        Notes
 ====================================================== ================== ================ ==========================================================
-`PyTables <https://github.com/PyTables/PyTables>`__    3.9.2              hdf5             HDF5-based reading / writing
+`PyTables <https://github.com/PyTables/PyTables>`__    3.8.0              hdf5             HDF5-based reading / writing
 `blosc <https://github.com/Blosc/c-blosc>`__           1.21.6             hdf5             Compression for HDF5; only available on ``conda``
 `zlib <https://github.com/madler/zlib>`__                                 hdf5             Compression for HDF5
 `fastparquet <https://github.com/dask/fastparquet>`__  2024.2.0           -                Parquet reading / writing (pyarrow is default)

doc/source/whatsnew/v3.0.0.rst

@@ -323,8 +323,6 @@ Optional libraries below the lowest tested version may still work, but are not c
 +------------------------+---------------------+
 | pyreadstat             | 1.2.6               |
 +------------------------+---------------------+
-| PyTables               | 3.9.2               |
-+------------------------+---------------------+
 | SciPy                  | 1.12.0              |
 +------------------------+---------------------+
 | SQLAlchemy             | 2.0.26              |

environment.yml

@@ -47,7 +47,7 @@ dependencies:
   - pyarrow>=10.0.1
   - pymysql>=1.1.0
   - pyreadstat>=1.2.6
-  - pytables>=3.9.2
+  - pytables>=3.8.0
   - python-calamine>=0.1.7
   - pytz>=2023.4
   - pyxlsb>=1.0.10

pandas/compat/_optional.py

@@ -48,7 +48,7 @@
     "s3fs": "2024.2.0",
     "scipy": "1.12.0",
     "sqlalchemy": "2.0.25",
-    "tables": "3.9.2",
+    "tables": "3.8.0",
     "tabulate": "0.9.0",
     "xarray": "2024.1.1",
     "xlrd": "2.0.1",

pyproject.toml

@@ -70,7 +70,7 @@ parquet = ['pyarrow>=10.0.1']
 feather = ['pyarrow>=10.0.1']
 hdf5 = [# blosc only available on conda (https://github.com/Blosc/python-blosc/issues/297)
         #'blosc>=1.20.1',
-        'tables>=3.9.2']
+        'tables>=3.8.0']
 spss = ['pyreadstat>=1.2.6']
 postgresql = ['SQLAlchemy>=2.0.25', 'psycopg2>=2.9.6', 'adbc-driver-postgresql>=0.10.0']
 mysql = ['SQLAlchemy>=2.0.25', 'pymysql>=1.1.0']
@@ -114,7 +114,7 @@ all = ['adbc-driver-postgresql>=0.10.0',
        'scipy>=1.12.0',
        's3fs>=2024.2.0',
        'SQLAlchemy>=2.0.25',
-       'tables>=3.9.2',
+       'tables>=3.8.0',
        'tabulate>=0.9.0',
        'xarray>=2024.1.1',
        'xlrd>=2.0.1',

requirements-dev.txt

@@ -36,7 +36,7 @@ psycopg2-binary>=2.9.6
 pyarrow>=10.0.1
 pymysql>=1.1.0
 pyreadstat>=1.2.6
-tables>=3.9.2
+tables>=3.8.0
 python-calamine>=0.1.7
 pytz>=2023.4
 pyxlsb>=1.0.10