Merge branch 'main' into read_iceberg

Author: datapythonista

.github/workflows/unit-tests.yml

@@ -241,12 +241,14 @@ jobs:
           fi
       - name: Build environment and Run Tests
         # https://github.com/numpy/numpy/issues/24703#issuecomment-1722379388
+        # Note: Pinned to Cython 3.0.10 to avoid numerical instability in 32-bit environments
+        # https://github.com/pandas-dev/pandas/pull/61423
         run: |
           /opt/python/cp313-cp313/bin/python -m venv ~/virtualenvs/pandas-dev
           . ~/virtualenvs/pandas-dev/bin/activate
           python -m pip install --no-cache-dir -U pip wheel setuptools meson[ninja]==1.2.1 meson-python==0.13.1
           python -m pip install numpy -Csetup-args="-Dallow-noblas=true"
-          python -m pip install --no-cache-dir versioneer[toml] cython python-dateutil pytest>=7.3.2 pytest-xdist>=3.4.0 hypothesis>=6.84.0
+          python -m pip install --no-cache-dir versioneer[toml] cython==3.0.10 python-dateutil pytest>=7.3.2 pytest-xdist>=3.4.0 hypothesis>=6.84.0
           python -m pip install --no-cache-dir --no-build-isolation -e . -Csetup-args="--werror"
           python -m pip list --no-cache-dir
           PANDAS_CI=1 python -m pytest -m 'not slow and not network and not clipboard and not single_cpu' pandas --junitxml=test-data.xml

Dockerfile

@@ -1,16 +1,20 @@
 FROM python:3.10.8
 WORKDIR /home/pandas
 
-RUN apt-get update && apt-get -y upgrade
-RUN apt-get install -y build-essential bash-completion
+RUN apt-get update && \
+    apt-get --no-install-recommends -y upgrade && \
+    apt-get --no-install-recommends -y install \
+    build-essential \
+    bash-completion \
+    # hdf5 needed for pytables installation
+    libhdf5-dev \
+    # libgles2-mesa needed for pytest-qt
+    libgles2-mesa-dev && \
+    rm -rf /var/lib/apt/lists/*
 
-# hdf5 needed for pytables installation
-# libgles2-mesa needed for pytest-qt
-RUN apt-get install -y libhdf5-dev libgles2-mesa-dev
-
-RUN python -m pip install --upgrade pip
 COPY requirements-dev.txt /tmp
-RUN python -m pip install -r /tmp/requirements-dev.txt
+RUN python -m pip install --no-cache-dir --upgrade pip && \
+    python -m pip install --no-cache-dir -r /tmp/requirements-dev.txt
 RUN git config --global --add safe.directory /home/pandas
 
 ENV SHELL="/bin/bash"

doc/source/user_guide/io.rst

@@ -26,7 +26,7 @@ The pandas I/O API is a set of top level ``reader`` functions accessed like
     text, Local clipboard, :ref:`read_clipboard<io.clipboard>`, :ref:`to_clipboard<io.clipboard>`
     binary,`MS Excel <https://en.wikipedia.org/wiki/Microsoft_Excel>`__ , :ref:`read_excel<io.excel_reader>`, :ref:`to_excel<io.excel_writer>`
     binary,`OpenDocument <http://opendocumentformat.org>`__, :ref:`read_excel<io.ods>`, NA
-    binary,`HDF5 Format <https://support.hdfgroup.org/HDF5/whatishdf5.html>`__, :ref:`read_hdf<io.hdf5>`, :ref:`to_hdf<io.hdf5>`
+    binary,`HDF5 Format <https://support.hdfgroup.org/documentation/hdf5/latest/_intro_h_d_f5.html>`__, :ref:`read_hdf<io.hdf5>`, :ref:`to_hdf<io.hdf5>`
     binary,`Feather Format <https://github.com/wesm/feather>`__, :ref:`read_feather<io.feather>`, :ref:`to_feather<io.feather>`
     binary,`Parquet Format <https://parquet.apache.org/>`__, :ref:`read_parquet<io.parquet>`, :ref:`to_parquet<io.parquet>`
     binary,`Apache Iceberg <https://iceberg.apache.org/>`__, :ref:`read_iceberg<io.iceberg>` , NA