Merge branch 'master' into gp-multioutput

Author: bwengals

.coveragerc

@@ -1,5 +1,4 @@
 [run]
 omit =
     # exclude tests files from coverage calculation
-    pymc3/tests/test_*.py
-    pymc3/examples/*
+    pymc/tests/test_*.py

.github/ISSUE_TEMPLATE.md renamed to .github/ISSUE_TEMPLATE/bug_report.md

@@ -1,4 +1,8 @@
-If you have questions about a specific use case, or you are not sure whether this is a bug or not, please post it to our discourse channel: https://discourse.pymc.io
+---
+name: 'Bug Report'
+about: Inform about bugs in the PyMC/PyMC3 library
+
+---
 
 ## Description of your problem
 
@@ -8,17 +12,22 @@ If you have questions about a specific use case, or you are not sure whether thi
 ```
 
 **Please provide the full traceback.**
+
+<details><summary>Complete error traceback</summary>
+
 ```python
-[The error output here]
+[The complete error output here]
 ```
 
+</details>
+
 **Please provide any additional information below.**
 
 
 ## Versions and main components
 
-* PyMC3 Version:
+* PyMC/PyMC3 Version:
 * Aesara/Theano Version:
 * Python Version:
 * Operating system:
-* How did you install PyMC3: (conda/pip)
+* How did you install PyMC/PyMC3: (conda/pip)

.github/ISSUE_TEMPLATE/config.yml

@@ -0,0 +1,8 @@
+blank_issues_enabled: false
+contact_links:
+  - name: PyMC Discourse
+    url: https://discourse.pymc.io/
+    about: Ask usage questions about PyMC/PyMC3
+  - name: Example notebook error report
+    url: https://github.com/pymc-devs/pymc-examples/issues
+    about: Please report errors or desired extensions to the tutorials and examples here.

.github/workflows/arviz_compat.yml

@@ -12,9 +12,9 @@ jobs:
         os: [ubuntu-latest, macos-latest]
         floatx: [float64]
         test-subset:
-          - pymc3/tests/test_distributions.py
-          - pymc3/tests/test_distributions_random.py
-          - pymc3/tests/test_sampling.py
+          - pymc/tests/test_distributions.py
+          - pymc/tests/test_distributions_random.py
+          - pymc/tests/test_sampling.py
       fail-fast: false
     runs-on: ${{ matrix.os }}
     env:
@@ -48,20 +48,20 @@ jobs:
             hashFiles('requirements.txt') }}
       - uses: conda-incubator/setup-miniconda@v2
         with:
-          activate-environment: pymc3-dev-py39
+          activate-environment: pymc-dev-py39
           channel-priority: strict
           environment-file: conda-envs/environment-dev-py39.yml
           use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly!
-      - name: Install pymc3
+      - name: Install pymc
         run: |
-          conda activate pymc3-dev-py39
+          conda activate pymc-dev-py39
           pip install -e .
           python --version
       - name: Install latest arviz
         run: |
-          conda activate pymc3-dev-py39
+          conda activate pymc-dev-py39
           pip uninstall arviz -y
           pip install git+git://github.com/arviz-devs/arviz.git
       - name: Run tests
         run: |
-          python -m pytest -vv --cov=pymc3 --cov-report=xml --cov-report term --durations=50 $TEST_SUBSET
+          python -m pytest -vv --cov=pymc --cov-report=xml --cov-report term --durations=50 $TEST_SUBSET

.github/workflows/jaxtests.yml

@@ -12,7 +12,7 @@ jobs:
         os: [ubuntu-latest]
         floatx: [float64]
         test-subset:
-          - pymc3/tests/test_sampling_jax.py
+          - pymc/tests/test_sampling_jax.py
       fail-fast: false
     runs-on: ${{ matrix.os }}
     env:
@@ -46,19 +46,19 @@ jobs:
             hashFiles('requirements.txt') }}
       - uses: conda-incubator/setup-miniconda@v2
         with:
-          activate-environment: pymc3-dev-py39
+          activate-environment: pymc-dev-py39
           channel-priority: strict
           environment-file: conda-envs/environment-dev-py39.yml
           use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly!
-      - name: Install pymc3
+      - name: Install pymc
         run: |
-          conda activate pymc3-dev-py39
+          conda activate pymc-dev-py39
           pip install -e .
           python --version
       - name: Install jax specific dependencies
         run: |
-          conda activate pymc3-dev-py39
-          pip install numpyro tensorflow_probability
+          conda activate pymc-dev-py39
+          pip install "numpyro>=0.8.0"
       - name: Run tests
         run: |
-          python -m pytest -vv --cov=pymc3 --cov-report=xml --cov-report term --durations=50 $TEST_SUBSET
+          python -m pytest -vv --cov=pymc --cov-report=xml --cov-report term --durations=50 $TEST_SUBSET