-
-
Notifications
You must be signed in to change notification settings - Fork 47k
Add Binomial Heap #1146
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Merged
cclauss
merged 7 commits into
TheAlgorithms:master
from
KirilBangachev:KirilBangachev-binomial_heap
Sep 5, 2019
Merged
Add Binomial Heap #1146
Changes from 4 commits
Commits
Show all changes
7 commits
Select commit
Hold shift + click to select a range
59aec25
Binomial Heap
KirilBangachev 949dcd9
Update binomial_heap.py
KirilBangachev abc1fd4
Update binomial_heap.py
KirilBangachev c9ae550
Update binomial_heap.py
KirilBangachev af87364
Update binomial_heap.py
KirilBangachev 3c23f5a
Update binomial_heap.py
KirilBangachev 903da33
Turned the tests into doctests
KirilBangachev File filter
Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
There are no files selected for viewing
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,356 @@ | ||
""" | ||
Min-oriented priority queue implemented with the Binomial Heap data | ||
structure implemented with the BinomialHeap class. There is also a helper | ||
class Node. | ||
|
||
Performance details: | ||
- Insert element in a heap with n elemnts: Guaranteed logn, amoratized 1 | ||
- Merge (meld) heaps of size m and n: O(logn + logm) | ||
- Delete Min: O(logn) | ||
|
||
Inserting and merging performance are the main advantages over a binary heap | ||
|
||
Reference: Advanced Data Structures, Peter Brass | ||
""" | ||
|
||
|
||
class Node: | ||
""" | ||
Node in a doubly-linked binomial tree, containing: | ||
- value | ||
- size of left subtree | ||
- link to left, right and parent nodes | ||
""" | ||
|
||
def __init__(self, val): | ||
self.val = val | ||
self.left_tree_size = ( # Number of nodes in left subtree | ||
0 | ||
) | ||
self.left = None | ||
self.right = None | ||
self.parent = None | ||
|
||
def mergeTrees(self, other): | ||
""" | ||
In-place merge of two binomial trees of equal size. | ||
Returns the root of the resulting tree | ||
""" | ||
assert ( | ||
self.left_tree_size == other.left_tree_size | ||
), "Unequal Sizes of Blocks" | ||
|
||
if self.val < other.val: | ||
other.left = self.right | ||
other.parent = None | ||
if self.right: | ||
self.right.parent = other | ||
self.right = other | ||
self.left_tree_size = ( | ||
self.left_tree_size * 2 + 1 | ||
) | ||
return self | ||
else: | ||
self.left = other.right | ||
self.parent = None | ||
if other.right: | ||
other.right.parent = self | ||
other.right = self | ||
other.left_tree_size = ( | ||
other.left_tree_size * 2 + 1 | ||
) | ||
return other | ||
|
||
|
||
class BinomialHeap: | ||
def __init__( | ||
self, bottom_root=None, min_node=None, heap_size=0 | ||
): | ||
self.size = heap_size | ||
self.bottom_root = bottom_root | ||
self.min_node = min_node | ||
|
||
def mergeHeaps(self, other): | ||
KirilBangachev marked this conversation as resolved.
Show resolved
Hide resolved
|
||
|
||
# Empty heaps corner cases | ||
if other.size == 0: | ||
return | ||
if self.size == 0: | ||
self.size = other.size | ||
self.bottom_root = other.bottom_root | ||
self.min_node = other.min_node | ||
return | ||
# Update size | ||
self.size = self.size + other.size | ||
|
||
# Update min.node | ||
if self.min_node.val > other.min_node.val: | ||
self.min_node = other.min_node | ||
# Merge | ||
|
||
# Order roots by left_subtree_size | ||
combined_roots_list = [] | ||
i, j = self.bottom_root, other.bottom_root | ||
while i or j: | ||
if i and ( | ||
(not j) | ||
or i.left_tree_size < j.left_tree_size | ||
): | ||
combined_roots_list.append((i, True)) | ||
i = i.parent | ||
else: | ||
combined_roots_list.append((j, False)) | ||
j = j.parent | ||
# Insert links between them | ||
for i in range(len(combined_roots_list) - 1): | ||
if ( | ||
combined_roots_list[i][1] | ||
!= combined_roots_list[i + 1][1] | ||
): | ||
combined_roots_list[i][ | ||
0 | ||
].parent = combined_roots_list[i + 1][0] | ||
combined_roots_list[i + 1][ | ||
0 | ||
].left = combined_roots_list[i][0] | ||
# Consecutively merge roots with same left_tree_size | ||
i = combined_roots_list[0][0] | ||
while i.parent: | ||
if ( | ||
( | ||
i.left_tree_size | ||
== i.parent.left_tree_size | ||
) | ||
and (not i.parent.parent) | ||
) or ( | ||
i.left_tree_size == i.parent.left_tree_size | ||
and i.left_tree_size | ||
!= i.parent.parent.left_tree_size | ||
): | ||
|
||
# Neighbouring Nodes | ||
previous_node = i.left | ||
next_node = i.parent.parent | ||
|
||
# Merging trees | ||
i = i.mergeTrees(i.parent) | ||
|
||
# Updating links | ||
i.left = previous_node | ||
i.parent = next_node | ||
if previous_node: | ||
previous_node.parent = i | ||
if next_node: | ||
next_node.left = i | ||
else: | ||
i = i.parent | ||
# Updating self.bottom_root | ||
while i.left: | ||
i = i.left | ||
self.bottom_root = i | ||
|
||
def insert(self, val): | ||
if self.size == 0: | ||
self.bottom_root = Node(val) | ||
self.size = 1 | ||
self.min_node = self.bottom_root | ||
else: | ||
# Create new node | ||
new_node = Node(val) | ||
|
||
# Update size | ||
self.size += 1 | ||
|
||
# update min_node | ||
if val < self.min_node.val: | ||
self.min_node = new_node | ||
# Put new_node as a bottom_root in heap | ||
self.bottom_root.left = new_node | ||
new_node.parent = self.bottom_root | ||
self.bottom_root = new_node | ||
|
||
# Consecutively merge roots with same left_tree_size | ||
while ( | ||
self.bottom_root.parent | ||
and self.bottom_root.left_tree_size | ||
== self.bottom_root.parent.left_tree_size | ||
): | ||
|
||
# Next node | ||
next_node = self.bottom_root.parent.parent | ||
|
||
# Merge | ||
self.bottom_root = self.bottom_root.mergeTrees( | ||
self.bottom_root.parent | ||
) | ||
|
||
# Update Links | ||
self.bottom_root.parent = next_node | ||
self.bottom_root.left = None | ||
if next_node: | ||
next_node.left = self.bottom_root | ||
|
||
def peek(self): | ||
KirilBangachev marked this conversation as resolved.
Show resolved
Hide resolved
|
||
return self.min_node.val | ||
|
||
def isEmpty(self): | ||
return self.size == 0 | ||
|
||
def deleteMin(self): | ||
assert not self.isEmpty(), "Empty Heap" | ||
|
||
# Save minimal value | ||
min_value = self.min_node.val | ||
|
||
# Last element in heap corner case | ||
if self.size == 1: | ||
# Update size | ||
self.size = 0 | ||
|
||
# Update bottom root | ||
self.bottom_root = None | ||
|
||
# Update min_node | ||
self.min_node = None | ||
|
||
return min_value | ||
# No right subtree corner case | ||
# The structure of the tree implies that this should be the bottom root | ||
# and there is at least one other root | ||
if self.min_node.right == None: | ||
# Update size | ||
self.size -= 1 | ||
|
||
# Update bottom root | ||
self.bottom_root = self.bottom_root.parent | ||
self.bottom_root.left = None | ||
|
||
# Update min_node | ||
self.min_node = self.bottom_root | ||
i = self.bottom_root.parent | ||
while i: | ||
if i.val < self.min_node.val: | ||
self.min_node = i | ||
i = i.parent | ||
return min_value | ||
# General case | ||
# Find the BinomialHeap of the right subtree of min_node | ||
bottom_of_new = self.min_node.right | ||
bottom_of_new.parent = None | ||
min_of_new = bottom_of_new | ||
size_of_new = 1 | ||
|
||
# Size, min_node and bottom_root | ||
while bottom_of_new.left: | ||
size_of_new = size_of_new * 2 + 1 | ||
bottom_of_new = bottom_of_new.left | ||
if bottom_of_new.val < min_of_new.val: | ||
min_of_new = bottom_of_new | ||
# Corner case of single root on top left path | ||
if (not self.min_node.left) and ( | ||
not self.min_node.parent | ||
): | ||
self.size = size_of_new | ||
self.bottom_root = bottom_of_new | ||
self.min_node = min_of_new | ||
# print("Single root, multiple nodes case") | ||
return min_value | ||
# Remaining cases | ||
# Construct heap of right subtree | ||
newHeap = BinomialHeap( | ||
bottom_root=bottom_of_new, | ||
min_node=min_of_new, | ||
heap_size=size_of_new, | ||
) | ||
|
||
# Update size | ||
self.size = self.size - 1 - size_of_new | ||
|
||
# Neighbour nodes | ||
previous_node = self.min_node.left | ||
next_node = self.min_node.parent | ||
|
||
# Initialize new bottom_root and min_node | ||
self.min_node = previous_node or next_node | ||
self.bottom_root = next_node | ||
|
||
# Update links of previous_node and search below for new min_node and | ||
# bottom_root | ||
if previous_node: | ||
previous_node.parent = next_node | ||
|
||
# Update bottom_root and search for min_node below | ||
self.bottom_root = previous_node | ||
self.min_node = previous_node | ||
while self.bottom_root.left: | ||
self.bottom_root = self.bottom_root.left | ||
if self.bottom_root.val < self.min_node.val: | ||
self.min_node = self.bottom_root | ||
if next_node: | ||
next_node.left = previous_node | ||
|
||
# Search for new min_node above min_node | ||
i = next_node | ||
while i: | ||
if i.val < self.min_node.val: | ||
self.min_node = i | ||
i = i.parent | ||
# Merge heaps | ||
self.mergeHeaps(newHeap) | ||
|
||
return min_value | ||
|
||
def __traversal(self, curr_node, preorder, level=0): | ||
KirilBangachev marked this conversation as resolved.
Show resolved
Hide resolved
|
||
""" | ||
Pre-order traversal of nodes | ||
""" | ||
if curr_node: | ||
preorder.append((curr_node.val, level)) | ||
self.__traversal( | ||
curr_node.left, preorder, level + 1 | ||
) | ||
self.__traversal( | ||
curr_node.right, preorder, level + 1 | ||
) | ||
else: | ||
preorder.append(("#", level)) | ||
|
||
def __str__(self): | ||
""" | ||
Overwriting str for a pre-order print of nodes in heap; | ||
Performance is poor, so use only for small examples | ||
""" | ||
if self.isEmpty(): | ||
return "" | ||
# Find top root | ||
top_root = self.bottom_root | ||
while top_root.parent: | ||
top_root = top_root.parent | ||
heap_as_list = [] | ||
self.__traversal(top_root, heap_as_list) | ||
return "\n".join( | ||
("-" * level + str(value)) | ||
for value, level in heap_as_list | ||
) | ||
|
||
|
||
# Unit Tests | ||
if __name__ == "__main__": | ||
# A random permutation of 30 integers to be inserted | ||
import numpy as np | ||
|
||
permutation = np.random.permutation(list(range(30))) | ||
# Create a Heap and insert | ||
TestHeap = BinomialHeap() | ||
|
||
# 30 inserts | ||
for number in permutation: | ||
TestHeap.insert(number) | ||
|
||
# Printing Heap | ||
print(TestHeap) | ||
# Deleting | ||
for i in range(20): | ||
print( | ||
TestHeap.deleteMin(), end=" " | ||
) # 0, 1, 2, 3, ... , 19 | ||
KirilBangachev marked this conversation as resolved.
Show resolved
Hide resolved
|
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Uh oh!
There was an error while loading. Please reload this page.