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[pre-commit.ci] pre-commit autoupdate #106

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Merged
merged 2 commits into from
Aug 16, 2023
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[pre-commit.ci] pre-commit autoupdate #106

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92992ad
[pre-commit.ci] pre-commit autoupdate
pre-commit-ci[bot] Aug 14, 2023
948babb
ruff fix
timtreis Aug 16, 2023
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12 changes: 6 additions & 6 deletions .pre-commit-config.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -9,25 +9,25 @@ ci:
skip: []
repos:
- repo: https://github.com/psf/black
rev: 23.3.0
rev: 23.7.0
hooks:
- id: black
- repo: https://github.com/pre-commit/mirrors-prettier
rev: v3.0.0-alpha.9-for-vscode
rev: v3.0.1
hooks:
- id: prettier
- repo: https://github.com/asottile/blacken-docs
rev: 1.13.0
rev: 1.15.0
hooks:
- id: blacken-docs
- repo: https://github.com/pre-commit/mirrors-mypy
rev: v1.3.0
rev: v1.5.0
hooks:
- id: mypy
additional_dependencies: [numpy, types-requests]
exclude: tests/|docs/
- repo: https://github.com/charliermarsh/ruff-pre-commit
rev: v0.0.272
- repo: https://github.com/astral-sh/ruff-pre-commit
rev: v0.0.284
hooks:
- id: ruff
args: [--fix, --exit-non-zero-on-fix]
3 changes: 1 addition & 2 deletions src/spatialdata_plot/pl/utils.py
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Expand Up @@ -797,8 +797,7 @@ def _map_color_seg(

if seg_boundaries:
seg_bound: ArrayLike = np.clip(seg_im - find_boundaries(seg)[:, :, None], 0, 1)
seg_bound = np.dstack((seg_bound, np.where(val_im > 0, 1, 0))) # add transparency here
return seg_bound
return np.dstack((seg_bound, np.where(val_im > 0, 1, 0))) # add transparency here

return np.dstack((seg_im, np.where(val_im > 0, 1, 0)))

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