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May 27, 2020
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1 change: 1 addition & 0 deletions .Rbuildignore
Original file line number Diff line number Diff line change
Expand Up @@ -17,3 +17,4 @@ derby.log
^\.github$
^CODE_OF_CONDUCT\.md$
^README\.html$
^codecov\.yml$
1 change: 1 addition & 0 deletions .github/.gitignore
Original file line number Diff line number Diff line change
@@ -0,0 +1 @@
*.html
51 changes: 44 additions & 7 deletions .github/workflows/R-CMD-check.yaml
Original file line number Diff line number Diff line change
@@ -1,4 +1,7 @@
on: [push, pull_request]
on:
push:
pull_request:
types: [opened, synchronize, reopened]

name: R-CMD-check

Expand All @@ -17,44 +20,78 @@ jobs:
- { os: windows-latest, r: 'devel'}
- { os: ubuntu-16.04, r: '3.5', cran: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}
- { os: ubuntu-16.04, r: '3.6', cran: "https://demo.rstudiopm.com/all/__linux__/xenial/latest"}

env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
PIP_NO_WARN_SCRIPT_LOCATION: false
RSPM: ${{ matrix.config.rspm }}
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

steps:
- uses: actions/checkout@v1
- uses: actions/checkout@v2

- uses: r-lib/actions/setup-r@master
with:
r-version: ${{ matrix.config.r }}

- uses: r-lib/actions/setup-pandoc@master

- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}

- name: Cache R packages
if: runner.os != 'Windows'
uses: actions/cache@v1
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-r-${{ matrix.config.r }}-${{ hashFiles('DESCRIPTION') }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-

- name: Install system dependencies
if: runner.os == 'Linux'
env:
RHUB_PLATFORM: linux-x86_64-ubuntu-gcc
run: |
Rscript -e "install.packages('remotes')" -e "remotes::install_github('r-hub/sysreqs')"
Rscript -e "remotes::install_github('r-hub/sysreqs')"
sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))")
sudo -s eval "$sysreqs"

- name: Install dependencies
run: Rscript -e "install.packages('remotes')" -e "remotes::install_deps(dependencies = TRUE)" -e "remotes::install_cran('rcmdcheck')"
run: |
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("rcmdcheck")
shell: Rscript {0}

- name: Install TensorFlow
run: |
Rscript -e "remotes::install_github('rstudio/reticulate') # TODO remove when reticulate 1.14 is on CRAN"
Rscript -e "reticulate::install_miniconda()"
Rscript -e "reticulate::conda_create('r-reticulate', packages = 'python==3.6.9')"
Rscript -e "tensorflow::install_tensorflow(version='1.14.0')"

- name: Check
run: Rscript -e "rcmdcheck::rcmdcheck(args = '--no-manual', error_on = 'warning', check_dir = 'check')"

- name: Session info
run: |
options(width = 100)
pkgs <- installed.packages()[, "Package"]
sessioninfo::session_info(pkgs, include_base = TRUE)
shell: Rscript {0}

- name: Check
env:
_R_CHECK_CRAN_INCOMING_: false
run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check")
shell: Rscript {0}

- name: Show testthat output
if: always()
run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash

- name: Upload check results
if: failure()
uses: actions/upload-artifact@master
Expand Down
51 changes: 51 additions & 0 deletions .github/workflows/pr-commands.yaml
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@@ -0,0 +1,51 @@
on:
issue_comment:
types: [created]
name: Commands
jobs:
document:
if: startsWith(github.event.comment.body, '/document')
name: document
runs-on: macOS-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/pr-fetch@master
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: r-lib/actions/setup-r@master
- name: Install dependencies
run: Rscript -e 'install.packages(c("remotes", "roxygen2"))' -e 'remotes::install_deps(dependencies = TRUE)'
- name: Document
run: Rscript -e 'roxygen2::roxygenise()'
- name: commit
run: |
git add man/\* NAMESPACE
git commit -m 'Document'
- uses: r-lib/actions/pr-push@master
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
style:
if: startsWith(github.event.comment.body, '/style')
name: style
runs-on: macOS-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/pr-fetch@master
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: r-lib/actions/setup-r@master
- name: Install dependencies
run: Rscript -e 'install.packages("styler")'
- name: Style
run: Rscript -e 'styler::style_pkg()'
- name: commit
run: |
git add \*.R
git commit -m 'Style'
- uses: r-lib/actions/pr-push@master
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
52 changes: 52 additions & 0 deletions .github/workflows/test-coverage.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,52 @@
on:
push:
branches:
- master
pull_request:
branches:
- master

name: test-coverage

jobs:
test-coverage:
runs-on: macOS-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2

- uses: r-lib/actions/setup-r@master

- uses: r-lib/actions/setup-pandoc@master

- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}

- name: Cache R packages
uses: actions/cache@v1
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-

- name: Install dependencies
run: |
install.packages(c("remotes"))
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("covr")
shell: Rscript {0}

- name: Install TensorFlow
run: |
Rscript -e "reticulate::install_miniconda()"
Rscript -e "reticulate::conda_create('r-reticulate', packages = 'python==3.6.9')"
Rscript -e "tensorflow::install_tensorflow(version='1.14.0')"

- name: Test coverage
run: covr::codecov()
shell: Rscript {0}
2 changes: 2 additions & 0 deletions README.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -22,6 +22,8 @@ knitr::opts_chunk$set(
[![Downloads](http://cranlogs.r-pkg.org/badges/parsnip)](https://cran.rstudio.com/package=parsnip)
[![lifecycle](https://img.shields.io/badge/lifecycle-maturing-blue.svg)](https://www.tidyverse.org/lifecycle/#maturing)

[![Codecov test coverage](https://codecov.io/gh/tidymodels/parsnip/branch/master/graph/badge.svg)](https://codecov.io/gh/tidymodels/parsnip?branch=master)
[![R build status](https://github.com/tidymodels/parsnip/workflows/R-CMD-check/badge.svg)](https://github.com/tidymodels/parsnip/actions)
<!-- badges: end -->

## Introduction
Expand Down
14 changes: 14 additions & 0 deletions codecov.yml
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@@ -0,0 +1,14 @@
comment: false

coverage:
status:
project:
default:
target: auto
threshold: 1%
informational: true
patch:
default:
target: auto
threshold: 1%
informational: true
26 changes: 13 additions & 13 deletions docs/404.html

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4 changes: 2 additions & 2 deletions docs/CODE_OF_CONDUCT.html

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4 changes: 2 additions & 2 deletions docs/articles/articles/Classification.html

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4 changes: 2 additions & 2 deletions docs/articles/articles/Models.html

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4 changes: 2 additions & 2 deletions docs/articles/articles/Regression.html

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4 changes: 2 additions & 2 deletions docs/articles/articles/Scratch.html

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