Skip to content

Missing mask1 and mask2 arguments in doc example for Similarity #493

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom
Closed
binarybottle opened this issue Nov 25, 2012 · 0 comments
Closed

Missing mask1 and mask2 arguments in doc example for Similarity #493

binarybottle opened this issue Nov 25, 2012 · 0 comments

Comments

@binarybottle
Copy link
Member

The mandatory arguments mask1 and mask2 are missing from the example here:

http://nipy.sourceforge.net/nipype/interfaces/generated/nipype.interfaces.nipy.utils.html
satra added a commit that referenced this issue Dec 17, 2012
@satra
Merge pull request #499 from chrisfilo/fix/similarity
e3d6846 
Fix #493 (similarity docs)
satra added a commit to satra/nipype that referenced this issue Dec 18, 2012
@satra
Merge branch 'master' into enh/rapidart
4d860ca 
* master: (24 commits)
  Fix nipy#493
  Fixes nipy#459
  fixed doctests
  changelog
  BF: Fixed several issues with GroupAndStack interface
  DOC: Various clean up an improvements to docstrings.
  DOC: Added example to LookupMeta docstring
  ENH: Allow meta_keys input to LookupMeta be a mapping.
  minor fixes
  doc: added version config info to doc
  enh: added output versioning as well
  BF: Wrap imports of optional deps in try-except block
  STY: Cleanup some long lines.
  ENH: Making interface module name dcmstack to match package
  ENH: Allow control of meta data filtering in DcmStack.
  BF: Fixed bug in CopyMeta
  ENH: Default to 'force=True' when reading DICOM files.
  BF: CopyMeta inputspec and outputspec were undefined.
  WIP: Initial interface to dcmstack package.
  sty: pep8
  ...
bpinsard pushed a commit to bpinsard/nipype that referenced this issue Dec 21, 2012
Merge branch 'master' into mri_convert
f53a6ab 
* master: (319 commits)
  fixed paths
  Back to dev
  0.7 release
  Code cleanup.
  doc: updated inputs help to indicate FSL and AFNI inaccuracy when using bounds_by_brainmask
  Fix nipy#493
  Fixes nipy#459
  fixed doctests
  changelog
  fix: ants workflows setup
  BF: Fixed several issues with GroupAndStack interface
  DOC: Various clean up an improvements to docstrings.
  DOC: Added example to LookupMeta docstring
  ENH: Allow meta_keys input to LookupMeta be a mapping.
  minor fixes
  deprecated version should be a string, added AFNITraitedSpec for backward compatibility
  docs
  PEP8
  name_source can be a list, make "infolder" a deprecated name
  Removed unnecessary outputsspecs
  ...
bpinsard pushed a commit to bpinsard/nipype that referenced this issue Dec 21, 2012
Merge branch 'master' into fsl_b0
9b55b11 
* master: (188 commits)
  fixed paths
  Back to dev
  0.7 release
  Code cleanup.
  doc: updated inputs help to indicate FSL and AFNI inaccuracy when using bounds_by_brainmask
  Fix nipy#493
  Fixes nipy#459
  fixed doctests
  changelog
  fix: ants workflows setup
  BF: Fixed several issues with GroupAndStack interface
  DOC: Various clean up an improvements to docstrings.
  DOC: Added example to LookupMeta docstring
  ENH: Allow meta_keys input to LookupMeta be a mapping.
  minor fixes
  deprecated version should be a string, added AFNITraitedSpec for backward compatibility
  docs
  PEP8
  name_source can be a list, make "infolder" a deprecated name
  Removed unnecessary outputsspecs
  ...
bpinsard pushed a commit to bpinsard/nipype that referenced this issue Dec 21, 2012
Merge branch 'master' into connect_func
19325d6 
* master: (319 commits)
  fixed paths
  Back to dev
  0.7 release
  Code cleanup.
  doc: updated inputs help to indicate FSL and AFNI inaccuracy when using bounds_by_brainmask
  Fix nipy#493
  Fixes nipy#459
  fixed doctests
  changelog
  fix: ants workflows setup
  BF: Fixed several issues with GroupAndStack interface
  DOC: Various clean up an improvements to docstrings.
  DOC: Added example to LookupMeta docstring
  ENH: Allow meta_keys input to LookupMeta be a mapping.
  minor fixes
  deprecated version should be a string, added AFNITraitedSpec for backward compatibility
  docs
  PEP8
  name_source can be a list, make "infolder" a deprecated name
  Removed unnecessary outputsspecs
  ...
bpinsard pushed a commit to bpinsard/nipype that referenced this issue Dec 21, 2012
Merge branch 'master' into nipy/trim
e7bf068 
* master: (264 commits)
  fixed paths
  Back to dev
  0.7 release
  Code cleanup.
  doc: updated inputs help to indicate FSL and AFNI inaccuracy when using bounds_by_brainmask
  Fix nipy#493
  Fixes nipy#459
  fixed doctests
  changelog
  fix: ants workflows setup
  BF: Fixed several issues with GroupAndStack interface
  DOC: Various clean up an improvements to docstrings.
  DOC: Added example to LookupMeta docstring
  ENH: Allow meta_keys input to LookupMeta be a mapping.
  minor fixes
  deprecated version should be a string, added AFNITraitedSpec for backward compatibility
  docs
  PEP8
  name_source can be a list, make "infolder" a deprecated name
  Removed unnecessary outputsspecs
  ...
bpinsard pushed a commit to bpinsard/nipype that referenced this issue Dec 21, 2012
Merge branch 'master' into spm/gzip
04d1305 
* master: (76 commits)
  fixed paths
  Back to dev
  0.7 release
  Code cleanup.
  doc: updated inputs help to indicate FSL and AFNI inaccuracy when using bounds_by_brainmask
  Fix nipy#493
  Fixes nipy#459
  fixed doctests
  changelog
  fix: ants workflows setup
  BF: Fixed several issues with GroupAndStack interface
  DOC: Various clean up an improvements to docstrings.
  DOC: Added example to LookupMeta docstring
  ENH: Allow meta_keys input to LookupMeta be a mapping.
  minor fixes
  deprecated version should be a string, added AFNITraitedSpec for backward compatibility
  docs
  PEP8
  name_source can be a list, make "infolder" a deprecated name
  Removed unnecessary outputsspecs
  ...
bpinsard pushed a commit to bpinsard/nipype that referenced this issue Dec 21, 2012
Merge branch 'master' into spm_interfaces
c357090 
* master: (266 commits)
  fixed paths
  Back to dev
  0.7 release
  Code cleanup.
  doc: updated inputs help to indicate FSL and AFNI inaccuracy when using bounds_by_brainmask
  Fix nipy#493
  Fixes nipy#459
  fixed doctests
  changelog
  fix: ants workflows setup
  BF: Fixed several issues with GroupAndStack interface
  DOC: Various clean up an improvements to docstrings.
  DOC: Added example to LookupMeta docstring
  ENH: Allow meta_keys input to LookupMeta be a mapping.
  minor fixes
  deprecated version should be a string, added AFNITraitedSpec for backward compatibility
  docs
  PEP8
  name_source can be a list, make "infolder" a deprecated name
  Removed unnecessary outputsspecs
  ...
bpinsard pushed a commit to bpinsard/nipype that referenced this issue Dec 21, 2012
Merge branch 'master' into fsl_model
8174663 
* master: (188 commits)
  fixed paths
  Back to dev
  0.7 release
  Code cleanup.
  doc: updated inputs help to indicate FSL and AFNI inaccuracy when using bounds_by_brainmask
  Fix nipy#493
  Fixes nipy#459
  fixed doctests
  changelog
  fix: ants workflows setup
  BF: Fixed several issues with GroupAndStack interface
  DOC: Various clean up an improvements to docstrings.
  DOC: Added example to LookupMeta docstring
  ENH: Allow meta_keys input to LookupMeta be a mapping.
  minor fixes
  deprecated version should be a string, added AFNITraitedSpec for backward compatibility
  docs
  PEP8
  name_source can be a list, make "infolder" a deprecated name
  Removed unnecessary outputsspecs
  ...
bpinsard pushed a commit to bpinsard/nipype that referenced this issue Dec 21, 2012
Merge branch 'master' into enh/dcmstack
2aa1aaf 
* master: (76 commits)
  fixed paths
  Back to dev
  0.7 release
  Code cleanup.
  doc: updated inputs help to indicate FSL and AFNI inaccuracy when using bounds_by_brainmask
  Fix nipy#493
  Fixes nipy#459
  fixed doctests
  changelog
  fix: ants workflows setup
  BF: Fixed several issues with GroupAndStack interface
  DOC: Various clean up an improvements to docstrings.
  DOC: Added example to LookupMeta docstring
  ENH: Allow meta_keys input to LookupMeta be a mapping.
  minor fixes
  deprecated version should be a string, added AFNITraitedSpec for backward compatibility
  docs
  PEP8
  name_source can be a list, make "infolder" a deprecated name
  Removed unnecessary outputsspecs
  ...
bpinsard pushed a commit to bpinsard/nipype that referenced this issue Mar 27, 2013
Merge branch 'master' into enh/fsl/flirt6
3e0af85 
* master: (188 commits)
  fixed paths
  Back to dev
  0.7 release
  Code cleanup.
  doc: updated inputs help to indicate FSL and AFNI inaccuracy when using bounds_by_brainmask
  Fix nipy#493
  Fixes nipy#459
  fixed doctests
  changelog
  fix: ants workflows setup
  BF: Fixed several issues with GroupAndStack interface
  DOC: Various clean up an improvements to docstrings.
  DOC: Added example to LookupMeta docstring
  ENH: Allow meta_keys input to LookupMeta be a mapping.
  minor fixes
  deprecated version should be a string, added AFNITraitedSpec for backward compatibility
  docs
  PEP8
  name_source can be a list, make "infolder" a deprecated name
  Removed unnecessary outputsspecs
  ...
bpinsard pushed a commit to bpinsard/nipype that referenced this issue Mar 27, 2013
Merge branch 'master' into nitime
c80adea 
* master: (80 commits)
  fixed paths
  Back to dev
  0.7 release
  Code cleanup.
  doc: updated inputs help to indicate FSL and AFNI inaccuracy when using bounds_by_brainmask
  Fix nipy#493
  Fixes nipy#459
  fixed doctests
  changelog
  fix: ants workflows setup
  BF: Fixed several issues with GroupAndStack interface
  DOC: Various clean up an improvements to docstrings.
  DOC: Added example to LookupMeta docstring
  ENH: Allow meta_keys input to LookupMeta be a mapping.
  minor fixes
  deprecated version should be a string, added AFNITraitedSpec for backward compatibility
  docs
  PEP8
  name_source can be a list, make "infolder" a deprecated name
  Removed unnecessary outputsspecs
  ...
bpinsard pushed a commit to bpinsard/nipype that referenced this issue Mar 27, 2013
Merge branch 'master' into ICC
4418c79 
* master: (214 commits)
  fixed paths
  Back to dev
  0.7 release
  Code cleanup.
  doc: updated inputs help to indicate FSL and AFNI inaccuracy when using bounds_by_brainmask
  Fix nipy#493
  Fixes nipy#459
  fixed doctests
  changelog
  fix: ants workflows setup
  BF: Fixed several issues with GroupAndStack interface
  DOC: Various clean up an improvements to docstrings.
  DOC: Added example to LookupMeta docstring
  ENH: Allow meta_keys input to LookupMeta be a mapping.
  minor fixes
  deprecated version should be a string, added AFNITraitedSpec for backward compatibility
  docs
  PEP8
  name_source can be a list, make "infolder" a deprecated name
  Removed unnecessary outputsspecs
  ...
bpinsard pushed a commit to bpinsard/nipype that referenced this issue Apr 17, 2013
Merge branch 'master' into lif_fmri
b7cbedd 
* master: (188 commits)
  fixed paths
  Back to dev
  0.7 release
  Code cleanup.
  doc: updated inputs help to indicate FSL and AFNI inaccuracy when using bounds_by_brainmask
  Fix nipy#493
  Fixes nipy#459
  fixed doctests
  changelog
  fix: ants workflows setup
  BF: Fixed several issues with GroupAndStack interface
  DOC: Various clean up an improvements to docstrings.
  DOC: Added example to LookupMeta docstring
  ENH: Allow meta_keys input to LookupMeta be a mapping.
  minor fixes
  deprecated version should be a string, added AFNITraitedSpec for backward compatibility
  docs
  PEP8
  name_source can be a list, make "infolder" a deprecated name
  Removed unnecessary outputsspecs
  ...
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@binarybottle @chrisgorgo